Gene Hhal_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1986 
Symbol 
ID4710445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2189369 
End bp2190148 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content64% 
IMG OID639856459 
Productputative GTP cyclohydrolase 
Protein accessionYP_001003552 
Protein GI121998765 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00294] conserved hypothetical protein TIGR00294 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACG TCCAGGGACG GGCCGACACC CGGCAGATCG AGATCAATAA GGTCGGCATC 
AAGGATATCC GCCACCCGGT GCGGGTACGC GACCGCACCG GGCGCGACCA GCACACCGTG
GCCACCTTCA GCATGTATGT GAACCTGCCG CAGCACTTCA AGGGCACGCA CATGTCGCGG
TTCGTCTCGA TCCTCGAGGG CCACGACCGC GAGGTCACCG TGGAGTCCTT CCACGAGATG
CTCGCCGAGA TGACCGACCG CCTCGAGGCC CACTCCGGGC ATATCGAGAT GGCGTTCCCT
TACTTCGTCA ACAAGCAGGC GCCGGTCACC GGGGTCGAGA GCCTGATGGA CTACGAGGTG
ACGTTCATCG GCGAGATCCA CGGCGGTCGC CACGAGACCT GGGTGCGCGT CGCCGTGCCG
ATCACCACCC TGTGCCCCTG CTCCAAGGAG ATCGCTGAGC GCGGCGCCCA CAACCAACGC
TCCCTGGTCG TGGTGACGGC GCTGATGGAC GGCTTCGTCT GGCTGGAAGA ACTCATCGAC
CTGGTCGAGC GGGAAGGCTC CTGCGAGCTC TACGGGTTGC TCAAACGCCC GGACGAGAAG
CACGTGACCG AACGCGCCTA CGACAACCCC AAGTTCGTCG AGGATGTGGT ACGGGACATC
GCCGGCCGGC TCAACGATGA TGGGCGCATC GCCGCCTACT CGGTGACCTC CGAGAACTAC
GAGTCCATCC ACAACCACTC CGCATTCGCG CTGATCGAGC AGGACAAGCG GGGGCGCTGA
 
Protein sequence
MEDVQGRADT RQIEINKVGI KDIRHPVRVR DRTGRDQHTV ATFSMYVNLP QHFKGTHMSR 
FVSILEGHDR EVTVESFHEM LAEMTDRLEA HSGHIEMAFP YFVNKQAPVT GVESLMDYEV
TFIGEIHGGR HETWVRVAVP ITTLCPCSKE IAERGAHNQR SLVVVTALMD GFVWLEELID
LVEREGSCEL YGLLKRPDEK HVTERAYDNP KFVEDVVRDI AGRLNDDGRI AAYSVTSENY
ESIHNHSAFA LIEQDKRGR