| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1983 |
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| Symbol | |
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| ID | 4710330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2185927 |
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| End bp | 2187837 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856456 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001003549 |
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| Protein GI | 121998762 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.267905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCA AGACCCAGCA GACCTACGAC GCCTCCGACA TCGAAGTCCT GACCGGACTG
GAGCCGGTAC GCCGGCGTCC CGGTATGTAC ACCGAAACCA ACCGCCCCGA CCACCTCGCC
CAGGAGGTGA TCGACAACAG TGTCGACGAG GCGGTCGCCG GACACGCCCG GCGCATCGAG
GTGACCGTGC ACGCTGATGG CTCCCTGGAG GTCAGCGACG ACGGCCGCGG CATGCCGGTG
GATATGCATC CCACCGAGGG GGTGCCCGCG GTCGAGGTGA TCCTCGGCCG GCTCCACGCC
GGCGGCAAGT TCTCGAGCAA GAGCTACCGC TATTCCGGCG GCCTGCACGG GGTCGGTGTC
TCCGTGGTGA ACGCGCTATC GACGCGGCTG CAGGTGCATA TCCGCCGCGA CGGCGCCGAG
CACACCATCG CCTTCTCGGC GGGGGAGCGG ATCGAGCCGC TGGAGCGGGT GGGCAAGACG
CGGGAGACCG GCACCACGCT GCGCTTCTGG CCGGATACCA GCTACTTCGA CAGCCCGCGC
TTCTCTCGCG CCCGGCTCGA GCACCTGCTG CGCGCCAAAG CGGTGCTCTG CCCGGGGCTG
ACGGTCATCC TGCGCGACGC CACCGGGGGC GAGGGGCAGG AGCCCGAGGT GCTGACCTGG
TACTACGAGG ATGGGCTGCG CGATTACCTG GCCGGTGCCG TGGCCGACTA CGAGCATCTG
CCGGATCCGC CGTTCACTGC CCGGCTCGGC TCCGAGCACG AGGAGATGGA GTGCGCCCTG
GTGTGGTTGC CGGAGGGCAG CGGGCCGGCG GAGAGCTACG TCAACCTCAT CCCCACTCCT
CAGGGCGGGA CCCACGTCAA CGGCCTGCGC ACCGGCCTGA CCGAGGCCAT GCGCGAGTTC
TGCGAGCTGC GTAACCTGCT GCCGCGCGGG GTGCGCATCG CCCCGGAGGA CGTCTGGGAG
CACATCAGCT ACGTGCTGTC GGTGAAGATG CATGAGCCGC AGTTCGCCGG GCAGACCAAG
GAGCGGCTCT CCTCGCGCAA CTGTGCCGCC TTCGTCTCCG GGGCCGTGAA GGACGCCTTC
AGCCTGTGGC TCAACGAGCA CACCCAGAGC GCCGAGCAGA TTGTCGATCT GGTGGTGCGC
GCCGCTCAGC GCCGCCAGCG GGCCGCCAAG AAGGTGACGC GCAAGCGGGT GGGCAGTGGG
CCGGCGCTGC CCGGCAAGCT GGCCGACTGC ACCGGGCAGG ATCCGGCGCG CAGCGAGCTC
TTCCTGGTCG AGGGGGATTC CGCCGGCGGC TCGGCCAAGC AGGCCCGCGA ACGGGAATTC
CAGGCGGTCA TGCCGCTGCG CGGTAAGATC CTCAATACCT GGGAGGTGGC TCCCGACGAG
GTCATGGCCT CCCAGGAGGT CCACGATATC GCCGTGGCCC TGGGGGTCGA CCCGGGCAGC
GAGGACCTCT CCGGGCTGCG CTACCACAAG GTCTGCGTCC TGGCCGACGC TGACCCCGAC
GGCGCGCACA TTGCCACGCT GCTCTGCGCC CTGTTCCAGC GCCACTTCCC GGCCCTGGTG
GCCGGCGGCC ACGTCTACGT GGCGATGCCG CCGCTGTATC GCATCGATGT TGGCAAGCAG
ACCTTCTACG CCCTCGACCG CGACGAGCGC CAGGGTATCC TCGACCGGAT CGAGGCCGAG
CGCATCAAGG GCAAGGTGCA GGAGACGCGC TTCAAGGGCC TTGGTGAGAT GAACCCGGTC
CAGCTGCGCG AGACCACCAT GGCCCCGGAT ACCCGCCGCC TGGTTCAGCT CACCGTCGAT
GACCCCGACG AGACCGAACG CCTGCTCGGC ATGCTGCTCG GCCGTGGCGC CGCAGCCCAG
CGCCGCGAGT GGCTGGAGAG CAAGGGCAAC CTGGCGGAAA TCGTCCTTTG A
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| Protein sequence | MTTKTQQTYD ASDIEVLTGL EPVRRRPGMY TETNRPDHLA QEVIDNSVDE AVAGHARRIE
VTVHADGSLE VSDDGRGMPV DMHPTEGVPA VEVILGRLHA GGKFSSKSYR YSGGLHGVGV
SVVNALSTRL QVHIRRDGAE HTIAFSAGER IEPLERVGKT RETGTTLRFW PDTSYFDSPR
FSRARLEHLL RAKAVLCPGL TVILRDATGG EGQEPEVLTW YYEDGLRDYL AGAVADYEHL
PDPPFTARLG SEHEEMECAL VWLPEGSGPA ESYVNLIPTP QGGTHVNGLR TGLTEAMREF
CELRNLLPRG VRIAPEDVWE HISYVLSVKM HEPQFAGQTK ERLSSRNCAA FVSGAVKDAF
SLWLNEHTQS AEQIVDLVVR AAQRRQRAAK KVTRKRVGSG PALPGKLADC TGQDPARSEL
FLVEGDSAGG SAKQAREREF QAVMPLRGKI LNTWEVAPDE VMASQEVHDI AVALGVDPGS
EDLSGLRYHK VCVLADADPD GAHIATLLCA LFQRHFPALV AGGHVYVAMP PLYRIDVGKQ
TFYALDRDER QGILDRIEAE RIKGKVQETR FKGLGEMNPV QLRETTMAPD TRRLVQLTVD
DPDETERLLG MLLGRGAAAQ RREWLESKGN LAEIVL
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