| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1982 |
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| Symbol | |
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| ID | 4710449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2183639 |
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| End bp | 2185891 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639856455 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001003548 |
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| Protein GI | 121998761 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0348571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAA ACGCTGCCTC CGACTTCGAG ACGCAACCGC TCCGCGAGTT CACCGAGCGG
GCCTACCTCG ACTACTCGAT GTACGTCATC CTCGACCGTG CGCTGCCCCA CGTCTCCGAC
GGGCTCAAGC CGGTGCAGCG GCGGATCGTC TACGCCATGT CCGAACTCGG GTTGTCGGCG
GCGGCGAAGT ACAAGAAATC GGCCCGTACC GTCGGCGACG TGCTCGGCAA GTACCACCCG
CACGGCGACG CGGCCTGCTA CGAGGCCATG GTCCACATGG CCCAGCCGTT CACCTATCGC
TATCCGTTGA TCGACGGCCA GGGCAACTGG GGCTCTCCGG ACGATCCGAA ATCCTTCGCC
GCCATGCGCT ACACCGAGGC GCGCCTGACC CCCTACGCCC GCGTGCTGCT CAACGAGTTG
GGGCAGGGGA CAGTGGAGTG GATTCCCAAC TTCGACGGCG CCCTGCAGGA GCCGGAACGC
CTGCCGGCGC GGCTGCCGAA CGTGTTGCTC AACGGCGGTT CGGGGATCGC CGTGGGCATG
GCCACGGATA TCCCGCCCCA CAACCTGCGC GAGGTGGTCG ATGCCTGCGT CCACCTCCTC
GATCGGCCCG AGGCCACCAC GGCGGAGCTC TGTGAGCACG TGCCGGCGCC GGACTTCCCC
ACCGCCTCGG ACGTGATCAC GCCGCGCGAG GAGCTGCGCA CCATCTACGA GCGGGGCCAC
GGTACCGTCC GCGCGCGGGC CCGCTGGGAG TATGAGCGGG AGCAGGCGCA GATCGTCATC
CACGCACTCC CTTACCAGGT GGCCGGCGCC AAGGTCATGG AGCAGATCGC CGCCCAGATC
CAGTCGCGCA AGCTGCCCAT GGTCGAGGAT CTGCGCGATG AGTCGGACCA CGACGCGCCG
GTGCGCATCG TCGTCCAGCT CCGCTCCCGG CGCCAGGATC CGGAGCGGGT CATGGATCAC
CTGTTCGCCA CCACGGATCT CGAGCGCGGC TACCGCGTCC ACCTGAACGT CATCGGCCTC
GACGGTCGGC CGCGGGTCTT CTCCCTGCGC GACCTTCTGG CCGAGTGGCT GAGCTTCCGC
ACCGAGACGG TCCGCCGTCG CCTGACTTGG CGCTTGGAGA AGGTGGAGGA TCGGCTCCAT
ATCCTCGAGG GCCTGCTCAC CGCGTATCTG AACATCGATG AGGTCATCGC CATCATCCGC
GAGGAGGACG AGCCCAAGCC GGTGCTCATG GAGCGCTTCG GGCTCAGTGA TGCCCAGGCC
GAGGCGATCC TCGAGCTGCG CCTGCGCCAC TTGGCCCGTC TGGAGGAGAT GAAGATCCGC
GGCGAGCAGG GCGATCTGGA GCGTGAGCGC GACGAGCTGC GCGCCACCCT TGGCGACGCC
GCCCGGCTGC GCGAGCAGGT CAAGAGCGAG CTCCTCGGTG ATGCCGAGGC CCACGGGGAC
GAGCGCCGCT CGCCGCTGGT CCAGCGCGGT CCGGCGCGGG CCATGGACGA GACCGAGCTG
ATGCCCAGCG AGCCGGTCAC CGTGGTGCTC TCGGAGAAGG GCTGGGTCCG CGCCGCCAAG
GGCCACGAGG TCGATGCGAC CGGGCTCTCC TACAAGGCCG GCGACGGCTA CCTGGATCAC
GCCCTGGGCC GGTCGAACCA GCCGGCCATC TTCCTCGACT CCACCGGTCG GGCCTACGCG
GTCCCGGCGC ATACCCTGCC GTCGGCGCGC AGCCAGGGGG AGCCGCTGAC CAAGCGGCTC
ACGCCCCCGG AGAAGGCCCG CTTCCAGTCG GTCCTCGCCG GCGATTCGGA GTCGCGCTGG
TTGCTCGCCT CCGATGCCGG CTACGGCTTC CGTGTCCCCC TGCGCGAGCT CTTCTCGCGC
AATCGCTCCG GGAAGGCGGT GCTGACCCTG CCGGATGGGG CGGCTGTGCT CCCGCCCGTA
ACGGTGCCCG CGGAGGCCGA TGGTGCCGAG GTGGTGGTGG CCAGTTCCGA TGGCCGACTG
CTGGTCTTCC CCCTTGAGGA GCTGCCGGAG ATGGCGCGAG GCAAGGGCAA CAAGCTCATT
GGCATCCCTG CCCAGCGCCT GCGCGATCGC GAGGAGGTGG TGGTCGCCGT GGCCGTGCTG
CCCGCCGGCG CAGCGCTGCG TGTGGAGGCC GGCAAGACCG GCAAGCGGCT GAGCCACAGC
GATCTGGAGG CGTTCCGCGC CGCCCGGGGC CGGCGCGGTG TTCAGTTGCC GCGCGGGCTG
CGCCAGATCC GTGGGCTCCA CGTGGAGAAT TGA
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| Protein sequence | MSENAASDFE TQPLREFTER AYLDYSMYVI LDRALPHVSD GLKPVQRRIV YAMSELGLSA
AAKYKKSART VGDVLGKYHP HGDAACYEAM VHMAQPFTYR YPLIDGQGNW GSPDDPKSFA
AMRYTEARLT PYARVLLNEL GQGTVEWIPN FDGALQEPER LPARLPNVLL NGGSGIAVGM
ATDIPPHNLR EVVDACVHLL DRPEATTAEL CEHVPAPDFP TASDVITPRE ELRTIYERGH
GTVRARARWE YEREQAQIVI HALPYQVAGA KVMEQIAAQI QSRKLPMVED LRDESDHDAP
VRIVVQLRSR RQDPERVMDH LFATTDLERG YRVHLNVIGL DGRPRVFSLR DLLAEWLSFR
TETVRRRLTW RLEKVEDRLH ILEGLLTAYL NIDEVIAIIR EEDEPKPVLM ERFGLSDAQA
EAILELRLRH LARLEEMKIR GEQGDLERER DELRATLGDA ARLREQVKSE LLGDAEAHGD
ERRSPLVQRG PARAMDETEL MPSEPVTVVL SEKGWVRAAK GHEVDATGLS YKAGDGYLDH
ALGRSNQPAI FLDSTGRAYA VPAHTLPSAR SQGEPLTKRL TPPEKARFQS VLAGDSESRW
LLASDAGYGF RVPLRELFSR NRSGKAVLTL PDGAAVLPPV TVPAEADGAE VVVASSDGRL
LVFPLEELPE MARGKGNKLI GIPAQRLRDR EEVVVAVAVL PAGAALRVEA GKTGKRLSHS
DLEAFRAARG RRGVQLPRGL RQIRGLHVEN
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