| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1978 |
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| Symbol | |
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| ID | 4710451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2180091 |
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| End bp | 2181041 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639856451 |
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| Product | lysine--tRNA ligase |
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| Protein accession | YP_001003544 |
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| Protein GI | 121998757 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCCG GCGGTCCGTG CGGCGCCGCC GACGGCGCCA CCGTGCGCCG GGTCGGTCAG
AAGCTGGCAC GGATCCGCGG CTTCTTCGCC GAGCGCGGGG TGGTGGAGGT GCAGCCGCCG
TGCCTCGGCC CGGCGGCCAT GGACCCGGCG CTGGAGAGCA TCCCGGTGCC CGGGGCGGCC
GCCGACGGCG ACGCCGCCTA CCTGCAGACC TCCCCGGAAT CGGCGATGAA GGCTATGCTC
GCCGCCGGCA GCAGCGACAT CTACTACCTC GGGCCGGCCT GGCGGGGCGG TGAGCGCGGG
CGCTGGCACG CCACCGAGTT CACGCTGCTC GAGTGGTACC GCATCGGCTT CGACCACCAC
CGGCTGATGG ACGAGGTGTC GGCGCTGGCG GCGCTGCTTG TCGGTGATCG CCCGGTCGAG
CGCTGGTCCT ACCAAGAGGC CTTTCGCCGT TACGCCGGTG TTGATCCCTT GGACGACGCG
GATGACGCAC TCCGCGACGC TCTGGCGGAC CAGGGCATCG ATCTGCACGG GGCCGCCCCG
AGCCGCGATG ACGCGCTCGA TCTGCTGCTC TCCCACGCCG TGGGGCCGGC CCTGGGCCAC
GGCCAGTTGA CCTTTCTCTA CGGGTTTCCG GCGAGCCAGG CGGCCCTGGC CCGCCTTGAC
GACGCTGACC CGCGCACTGC GCGGCGTTTC GAGTGCTTCA TCGACGGCCT GGAGATCGCC
AACGGCTACC ACGAACTCAC CGACCCCGCC GCGCAGCGGG CGCGCTTCGA GGCCGAGCAG
GCCGAGCGCC GCGGCGCCGG GCAGCCGGTG TACGACCTCG ACGAGCGGCT GCTCGGCGCC
CTGGAGCGCG GTGTACCCGA CTGCGCCGGG GTGGCGCTGG GCGTCGACCG GCTGCTGGCG
GTGGCGCTGG GGGCAGAGTC GTTGGCGGCG GTGCGGGGTT CGGGCGGCTA A
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| Protein sequence | MAAGGPCGAA DGATVRRVGQ KLARIRGFFA ERGVVEVQPP CLGPAAMDPA LESIPVPGAA
ADGDAAYLQT SPESAMKAML AAGSSDIYYL GPAWRGGERG RWHATEFTLL EWYRIGFDHH
RLMDEVSALA ALLVGDRPVE RWSYQEAFRR YAGVDPLDDA DDALRDALAD QGIDLHGAAP
SRDDALDLLL SHAVGPALGH GQLTFLYGFP ASQAALARLD DADPRTARRF ECFIDGLEIA
NGYHELTDPA AQRARFEAEQ AERRGAGQPV YDLDERLLGA LERGVPDCAG VALGVDRLLA
VALGAESLAA VRGSGG
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