| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1977 |
|---|
| Symbol | |
|---|
| ID | 4710450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 2179759 |
|---|
| End bp | 2180094 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639856450 |
|---|
| Product | TraR/DksA family transcriptional regulator |
|---|
| Protein accession | YP_001003543 |
|---|
| Protein GI | 121998756 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG AGCAGACCGA AACATTCCGC CAGCAACTGC TGGCGCTGCG TGAGGAGACC
GTCGCCGCTG CGGAGTCCGC GCGGGCTGCC ACTGCCACGG TGGAGCTCGA TCAGACCCGT
CAAGGACGGC TGTCGCGGAT GGACGCCCTC CAGGGCCAGC AGATGGCCCT GGAGCGCGAG
CGGCGCCGTC AGCACCTGGT CCAGCGCATC GACGGCGCAC TGCGCCGGCT GGACAGCGGC
GACTTCGGCT ACTGCTTCAT CTGCGGCGAG GACATCGACC CGCGCCGCCT CCAGGCCGAC
CCCACGCTGA CAAGATGTGC CGAGTGCGCG GCTTAG
|
|---|
| Protein sequence | MTDEQTETFR QQLLALREET VAAAESARAA TATVELDQTR QGRLSRMDAL QGQQMALERE
RRRQHLVQRI DGALRRLDSG DFGYCFICGE DIDPRRLQAD PTLTRCAECA A
|
|---|
| |