| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1969 |
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| Symbol | |
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| ID | 4710336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2169472 |
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| End bp | 2171193 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639856442 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001003535 |
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| Protein GI | 121998748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTGG CTGCGCTGGT CCTGCTGATC CTCCTGGCCC TGCTTGGCCG TCCGGCCTAC
GCCGGGGTGG AGGTGGTCAT CGAGGGGGTT AGCGGCGAGC TCGCCGATCA GGTGCGCGGC
CACGTGGGGG AGCCGGCGTC TGCCGATCCC GCCGCGATCA CCGCGTTCCG TCGCCGCGCG
GTGGAGCGGG CCGAACGCGG TTTGCAGGCC GTGGGCCACT ACGATGCACA GATCGAGGTG
CGTCGGGAGC GTCTCGACGA ACAGGTGCGA TTGACCATCG TCGTCGACCC TGGCGAACCG
GTGCGTCTGA GCCGGATCCA TGTGCTGATC ACCGGACCGG GAGGGACCGA TCCGGCCTTC
GCTGGCATCG AGCAGCGCTT GGGGATCGGT GAGGGTGATG TTCTCCACCA CGGTCGCTAC
GAGGCGGCGC GTCGGGCTAT CCAGAACCTG GCGCTGGACC AGGGGTACTT CGATGGTCGC
TACGTCACCC GGCGCGTGGA GGTCGACCCG GAGGCCCGCG AGGCCGAGGT GATCCTGCAC
TACCACACCG GTGTGCGCTA CCGCTTCGGC GCGGTACGGT TCTCGGAATC GCCGCTGGCC
GAGGCGTTCC TGCAGCGGCT GGTTCCCTTC GAACGCGACG AGCCGTATAC CGCCGAACAG
GTGGCGGCCT TCAACCGCGC GTTGCTCGAC AGTGGCTACT TTTCCGATGT GCGGGTGCGT
CCGCGGCGGG ATCGCACCGA GGATGATCAG GTGCCGGTGG ACGTGGACCT CTCCGCGCGG
GCCCGGCACG AGATCACCAC TGGCGTCGGC TTCACCACCG ACCTCGGCGC CCGCGTGCGC
CTGGGCTGGC GTCGGCCGTG GGTGAACCAG TGGGGGCACT CGCTGGCGGT GGAGAGCGAG
ATCGCCGAGC GCCGGCAGAA CCTCATCAGC ACCTATACGG TGCCGCTGCG CGATCCCCTG
CGCACCCAGC TGGAGTACCA GCTCGGTATC CAGGCGCAGG ACGTGGCCGA TATCGACACC
GAACAGGTCA CCGCATCGGT TCAGCACCGG CATCGCCTCG AGAGCGGTTG GCAGCAGGTC
CTGTCCCTGC GCGCCTACCG CGAGCGTTAC CGCATCGACG ACGATCAGCG CACCACCCAG
CTCTACATCC CCGGGGTTAG CTGGAGCCGG GTGCGCAGCC GCGGTGGGCT CGATCCGCGC
TGGGGCGACC GGCAAATGCT GAGCCTGGAG GTGGCCGACC CGGATCTGGC TTCGGACATC
GAGCTGCGCC GCGTGCGCAC CGCCACCCGC TGGGTGCGCA CGCTGGGGGA GCGCCACCGG
TTCCTTATCC GTGGCGAGGT CGGTGCGCTG GCCACGGACT CGTTCGTCGA TGTGCCGCCT
TCGCTGCGCT TCTACGCCGG TGGCGATCAG AGTGTACGCG GCTATAAGTA CCAGACTCTG
GGGCCCGAGG AAGATGGGAC CACCATCGGT GGCCGTTATC TGGCGGTGGG CAGTGCCGAA
TACGGTTATC AGCTCACCCC CAACTGGCGC CCGGCGATCT TCGTGGACAG CGGTAATGCC
TACGCCGACT GGGATGACTT GAGTGCTGAG GCGAAGACGG GTGCTGGCTT CGGCATCCGC
TGGTCGTCCC CGGTGGGGCC GGTCCGCCTC GACCTCGCCT CCACGGTGGG GGAAGCGGAC
GACTCCTGGC GTCTCCACTT CTCGATGGGG TCGGATCTGT GA
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| Protein sequence | MRLAALVLLI LLALLGRPAY AGVEVVIEGV SGELADQVRG HVGEPASADP AAITAFRRRA
VERAERGLQA VGHYDAQIEV RRERLDEQVR LTIVVDPGEP VRLSRIHVLI TGPGGTDPAF
AGIEQRLGIG EGDVLHHGRY EAARRAIQNL ALDQGYFDGR YVTRRVEVDP EAREAEVILH
YHTGVRYRFG AVRFSESPLA EAFLQRLVPF ERDEPYTAEQ VAAFNRALLD SGYFSDVRVR
PRRDRTEDDQ VPVDVDLSAR ARHEITTGVG FTTDLGARVR LGWRRPWVNQ WGHSLAVESE
IAERRQNLIS TYTVPLRDPL RTQLEYQLGI QAQDVADIDT EQVTASVQHR HRLESGWQQV
LSLRAYRERY RIDDDQRTTQ LYIPGVSWSR VRSRGGLDPR WGDRQMLSLE VADPDLASDI
ELRRVRTATR WVRTLGERHR FLIRGEVGAL ATDSFVDVPP SLRFYAGGDQ SVRGYKYQTL
GPEEDGTTIG GRYLAVGSAE YGYQLTPNWR PAIFVDSGNA YADWDDLSAE AKTGAGFGIR
WSSPVGPVRL DLASTVGEAD DSWRLHFSMG SDL
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