Gene Hhal_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1961 
Symbol 
ID4710350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2157082 
End bp2157819 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content72% 
IMG OID639856434 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001003527 
Protein GI121998740 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA AGGATCCGGT GGGCATCAGC CGCCGGCGGC TGCTCGGTGG TGCGGCGGCG 
CTCGCCGGCG CCGCCCTCGC TCCGGGGCTG TTCCTGGTCC AGGCACGCCC CGATGGCGGT
GCCGATGCCG GGGTCCGCTG GGGCCTGCTG GTCGACACCA CCCGCTGCGC GGAAGACTGC
CAAGCCTGCG TGGACGCCTG CCGCGAGGAA AACGGTTGGC CCGCCGGCGA CGGTTCGGCC
GGCGACATCC ACTGGATCCG CAAGGTCGAC CTCGAACCGG TGCGGGAAGA CGGCCCCGGC
CATTCCGCGC CGGTGATGTG TCAGCACTGC GCCGAGCCGC CTTGCGTCAG CGTCTGCCCC
ACCCGGGCCT CATTCCGGCG CGCCGACGGC ATCGTCCTGG TCGACAAGCA CCGCTGCATT
GGCTGTCGCT ACTGCATGGT CGCCTGCCCG TTCCACGCTC GCGCCTTCGT CGACGAACCC
GTGGCCGAGC GCTCACCCAA TCATCCGCGA GGCAAGGGAA CCGTGGAGGC GTGCACCCTC
TGCGTACACC GCATCGACCG GGGCGAGGCG CCGGCCTGCG TGGCGCGCTG TGCCGAGACG
GGACACGCGG CGCTGATCTT CGGCGACCTG AACGACCCCG ACAGCGAGAT TCGCCAGGCC
CTGCGCAAGC ACCGGGCCGA GCCCCTGCGC CCGGATCTGG CACTGGATGC CGGCGTGCGC
TACCACGGAC TGTCCTGA
 
Protein sequence
MSDKDPVGIS RRRLLGGAAA LAGAALAPGL FLVQARPDGG ADAGVRWGLL VDTTRCAEDC 
QACVDACREE NGWPAGDGSA GDIHWIRKVD LEPVREDGPG HSAPVMCQHC AEPPCVSVCP
TRASFRRADG IVLVDKHRCI GCRYCMVACP FHARAFVDEP VAERSPNHPR GKGTVEACTL
CVHRIDRGEA PACVARCAET GHAALIFGDL NDPDSEIRQA LRKHRAEPLR PDLALDAGVR
YHGLS