Gene Hhal_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1943 
Symbol 
ID4710763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp2141088 
End bp2141594 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content65% 
IMG OID639856416 
Producthypothetical protein 
Protein accessionYP_001003509 
Protein GI121998722 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.862348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAC GGAAGGGGGA GCGAGGCCGG CTTGGTGGTG TGGCCGCTGG CCTGCTGGCA 
CTCAGTGGCG CGCTGGCCAG CGCAGCGGCG GAGGATTTCC CGGAGCCTCA ACTGGTGTTC 
CACATCGATA TGCAGGAGCC GCAGCGCGTC AGCTCCACCA TCTTCAACGC CAATAACGCT 
GCGAGCCACT ACGAAGGGCA GTTGCTCGAT CACGATGTGC GGATCGTCCT GCACGGGTTC 
GGTCTGCGGT ATGTGACCGA GGACCGGCTG GCGGACACCG CCTACGAGGT GGATGAGGCC 
GACGTGGCCG AGCGTGACGA TCTACTCCAG CGGCTGCGCA CGCTCTCCGA TACCTACGAC 
GTGCAGCTGG AGGTCTGTGC CAGCTCCATG GACGAGGCGG GGCTGGAGCA GGAGGATCTG 
GCGGTGGATG CGGAGCTGAT CGACTACGGG GCCACCCGCC TCGAAGAGCT CCAGCGCCGC 
GGCTTCTCGT ATATCAAGAT CCAGTAG
 
Protein sequence
MTARKGERGR LGGVAAGLLA LSGALASAAA EDFPEPQLVF HIDMQEPQRV SSTIFNANNA 
ASHYEGQLLD HDVRIVLHGF GLRYVTEDRL ADTAYEVDEA DVAERDDLLQ RLRTLSDTYD 
VQLEVCASSM DEAGLEQEDL AVDAELIDYG ATRLEELQRR GFSYIKIQ