Gene Hhal_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1941 
Symbol 
ID4710765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp2140177 
End bp2140662 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID639856414 
Producttransmembrane proetin, twin-arginine translocation pathway signal 
Protein accessionYP_001003507 
Protein GI121998720 
COG category[S] Function unknown 
COG ID[COG5501] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.310048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAGC ATCACGTCGA CACACAACGC CGCAAGATCC TGACCGGCGC CCTCGGCCTG 
GGAGGCGTCG GGACCGCCGT GGGGCTCGGC GTCCTCGCCC CGTCCCAGGC CCTCGCCTCG 
TGGCGGGAGG AGTCGATCAT GGCCACCAGC CTCGAGGAGG GCCTGAACGC GGTGCTCGGC 
GCCAGCGAAT ACGAGGAGAG CGACGAGATC CACATCGACG CCCCGGAGGT GGCCGAGAAC 
GGCGAGACGG TGCCGATCAC CATCGACACC TCGCTGCCGG ACGTTGAGAG CATCACCGTC 
TACGTCCCGG AGAACAACGC CCCGGTCTCG GCCGTCTTTG AACTCGGCGG CAAGACCAAG 
CCCAAGGTCT CGCAGCGGAT CCAGATGGCC GACACCTCGG ACGTCGTGGC GGTGGCCAAG 
AGCAACGGCA AGCTCTACGG CACCAGCCGC CGGGTCCGGG TCACCATCGG CGGCTGCGGC 
GGCTGA
 
Protein sequence
MDQHHVDTQR RKILTGALGL GGVGTAVGLG VLAPSQALAS WREESIMATS LEEGLNAVLG 
ASEYEESDEI HIDAPEVAEN GETVPITIDT SLPDVESITV YVPENNAPVS AVFELGGKTK 
PKVSQRIQMA DTSDVVAVAK SNGKLYGTSR RVRVTIGGCG G