Gene Hhal_1931 details

Gene Information

• Locus tag: Hhal_1931
• ID: 4710780
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2128259
• End bp: 2128936
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639856404
• Product: hypothetical protein
• Protein accession: YP_001003497
• Protein GI: 121998710
• COG category: [S] Function unknown
• COG ID: [COG3105] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.206911
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGCGT TTGATCCTAT CCTGCTACTC GTCGTCGGTG CCGTGGTCGG CGCCGCTGTG 
GGTGCCTACG TCGGGCGCGC CTCGTCGCCC AACACCCAGG AGATCCGCGA CGCCGAGAGC 
GTGGCCCGTC GCAACCGCGA GGAAGTGCGC AACGTCCGCA GTGAAGTGGA CCAGCACTTC 
GAGCAGACCG CCCAGATCAT GGGTGAGGTC ACCAAGGCGT ATCGTCGTCT GTACGAGCAC 
ATGGCCACCA GTTCCCAGCG CCTGGCCCCG CGCCGCACTC AGGACCTGGT GAAGTCCCTG 
GGCGACCAGC GCCTGCTCTC CCAGGACGTG GTCGAGCAGT CCGCGCGGCG CATGAGCGAG 
ATGAAGGCCA AGGAGCAGCG TGAGGCCCAG GCCCGCCGCC AGATCAGCCA GGAGCGTTCC 
GAGCGTTCTT CCGGCCAGCA GCAGCGGTCC GCCTCGGCCA GCAGCAGCCG CAGCAGCGAT 
TCCTCCGAGT CCGCTATCGG CTCCTCCACC CGCTCCTCCG AGTCCGCCAT CGGCCGTCGT 
CCGACGCGCA GCCGCTCCAC CACCTCCTCC TCCCGGTCCC GCAGCAGTGC CCCGGAGCGC 
ACCCGGAGCA CGGCCACCGA GGAGCGGGGC AGCGGTAGCA CCGAGAAGCG GCGCCGGCGC 
CCCGGCATCT TCAGCTGA 

 

Protein sequence

MEAFDPILLL VVGAVVGAAV GAYVGRASSP NTQEIRDAES VARRNREEVR NVRSEVDQHF 
EQTAQIMGEV TKAYRRLYEH MATSSQRLAP RRTQDLVKSL GDQRLLSQDV VEQSARRMSE 
MKAKEQREAQ ARRQISQERS ERSSGQQQRS ASASSSRSSD SSESAIGSST RSSESAIGRR 
PTRSRSTTSS SRSRSSAPER TRSTATEERG SGSTEKRRRR PGIFS