| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1904 |
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| Symbol | |
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| ID | 4710674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2096159 |
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| End bp | 2098957 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856377 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001003470 |
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| Protein GI | 121998683 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.636099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCCGG CGTGGACCAT CCTGCTGGTT TCGGCGCTCT ACGTCGGGCT CCTGTTCGCC
GTCGCCTATA CGGCGGACAA GCTCGGCGAT CGCGGCCTGT CGCTGGTCAA CAACCCGTAC
GTCTACACCC TGTCCATCGC CGTCTACTGC ACGGCCTGGA CCTTCTACGG CAGCGTCGGC
CTGGCGGCCG AACAAGGGCT GGCCTTCCTG ACCATCTACC TCGGCCCGAC CCTGATGGCC
ATCGTCTGGT GGGTGGTGCT GCGCAAGATC GTGCGCATCA GCAAGCTCTA CCGGCTCACC
TCCATCGCCG ATTTCATCGC CGCCCGTTAC GGCAAGAGCA TGCTCCTCGG CGGCCTGGCG
GCATTCATCG CCCTAGTCGG CACCACCCCG TACATCGCGC TGCAACTCCA GGCGGTCTCC
TCGAGCTTCG ACGTCCTGCT CCATTTCCCG GACATGGAGG CGGTCCAGGC GGGCAGTGCC
GGGCTTCTGG ACGACAAGGC GCTCTACGTG GCGGCCCTCC TGGCCCTGTT CACCATCCTC
TTCGGCACCC GCCACATCGA CGCCACCGAA CGCCTGGAGG GCATGGTGGT GGCGGTGGCC
TTCGAGTCGG TGGTCAAGCT GGTCGCCTTC CTGGCGGTCG GGATCTTCGT CACCTTCGTC
CTCTTTGCCG GGCCCGTGGA GCTCTTCCGC GAGGCAGCGG CCTCGCCGGC CATCGCGGAG
CTCGGCCTGC TCACCGGACT ACCCGGCGGC TACCAGAACT GGATCGCCAT GCTGGCGCTC
TCGGCCCTGG CGATCCTCTT CCTGCCGCGG CAATGGCAGG TCAGCGTGGT GGAGAACGTC
AACGAGGACC ACATCCGCAC GGCCTCCTGG CTCTTCCCGC TCTATCTACT GGTCATCAAC
CTGTTCGTCC TGCCCGTGGC CCTGGCGGGG CTGCTGTTCT TCGGCGACGA GATCCCCGGC
GACGACTACG TGCTGGCCCT GCCCCTGGCC GTCGATCAGG GGCTGCTCGG CCTGCTGGTC
TACATCGGCG GCTTCTCGGC GGCCACCGGC ATGGTGATCG TCGCCACCAT CGCCGTGGCC
ATCATGGTCA GCAATGACAT TGTGACCCCG GCGCTGCTGC GCCTGCGCCG CTTTCACGCC
CGGGGGCGCC ACGATCTGTC GAGGCTGATC GTCACCATCC GGCGCCTGGT GATCTGCGCG
ATCCTCGCCC TCGGCTACGC CTACTACCTG CTCATCGCCG ACACCCACGC CCTGGTCTCC
ATCGGGCTGA TCTCCTTTGC CGCGGTGGCG CAGTTCGCGC CGGCGGTCCT GCTCGGGCTG
TTCTGGAAGG GGGCGAGCCG GCGCGGCGCC CTGGCCGGGC TGGTGGCCGG GTTCCTGCTC
TGGGCGTACA CCCTGCTGCT GCCTTCGCTG GCCGAGGCGG GGCTGCTCGG CGAGCGGCTG
CTCACCGACG GCCCGTGGGG CATTGAATGG CTGCACCCCT ACGGCCTGTT CGGTATGGAG
GGCATGGACC CCATCGCCCA CGCCTTCTTC TGGACCCTGC TGGCCAACCT CGGGCTGCTC
CTCGGTGTCT CGCTGTTCGA TCGCCAGGGC GACATGGAAC GCATCCAGGC CACGCTGTTC
GTCGACGTCT TCCTGCGCTC GGAGCGCGAC GCCCGCTTCT GGGAGGGCAC CGCCACCGTC
GGCGACTTGC AGGACCTGCT CGGCCGCTTC CTCGGCCCGG AGCGGGCCGC CGGGGTCATC
CGTGAGTACG GCGCCCACCG CGGACGTCCG CTGGATGAGG CCGAGCAGGC ACAGCCCGAG
CTGGTCAATC AGGTCGAGCG CCTGCTCGCC GGCTCCATCG GCTCCGCCTC GGCCCGGGTG
ATGGTGGCCT CCATCGTCAA GGGCGAGGCG CTCTCCTACG AGGGGGTCAT GGAGATCCTC
GACGCCACCT CGCGGGCCAT CGAGTACTCG CGGCGGCTGG AGGAGAAATC CCACGCCCTG
GAGAGCGCCA CCGAGGAGCT GCGCGCCGCC AACGAGCGGC TCAAGGAGCT GGACCAGCTC
AAGGACGAGT TCGTCTCCAT GGTCAGCCAC GAGCTGCGCA CGCCGCTGAC CTCGATCCGC
GCCTTCGGCG AGATCCTACT CAACAACCCG GAGATGGACG CCGATCAGCG CCGCGAGTTC
CTGGAGGTGG TCGTCCGCGA GAGCGAGCGG CTGACCCGGC TGATCAACCA GGTACTGGAC
CTGTCCAAGA TCGAGAGCGG CTCGGCCCAG TGGCAGCTGG AGGACGTGGA TCTCTCGCGC
CTGGCCCGGG AGGCGGCGGA GTCCACCCAG CAGCTGTTCA CCGACCGGCA GACGCAGCTG
CACATCGAGA TCGCCAGCGA CGACAACGCC ATCAAGGGCG ATCCGGACCG CCTGATGCAA
CTGATCATCA ACCTCCTGTC CAACGCCGCC AAGTTCACCG AGCCCGGCGA GGGGCAGGTG
TGGCTGCGCC TGGAGAAGGG CCGCGGCGAC ACCCTGCGCC TGTCGGTCAC GGATAACGGA
CCGGGGATCA GTGCCGAGGA TCAGCGGCGG ATCTTCGACA AGTTCCACCA GATCTCTCAG
CAGCAGGCCG GCAAGCCCAA GGGCAGCGGC CTGGGGCTGG CCATCTGCCG GCTGATCGCC
GACGCCCACT GGGGCACGCT CTGGGTCGAC AGCGAGCCCG GCGCCGGCGC CAGCTTCGTC
TGCAAGCTGC CCCGCGCCGG CGGCGAGCAC TGCAACGTCA CCGGGTACGT GGCGTTCTCC
GAGCGCGGCC CGGCACCCCC TGAGGAGGAG CCGTCGTGA
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| Protein sequence | MLPAWTILLV SALYVGLLFA VAYTADKLGD RGLSLVNNPY VYTLSIAVYC TAWTFYGSVG
LAAEQGLAFL TIYLGPTLMA IVWWVVLRKI VRISKLYRLT SIADFIAARY GKSMLLGGLA
AFIALVGTTP YIALQLQAVS SSFDVLLHFP DMEAVQAGSA GLLDDKALYV AALLALFTIL
FGTRHIDATE RLEGMVVAVA FESVVKLVAF LAVGIFVTFV LFAGPVELFR EAAASPAIAE
LGLLTGLPGG YQNWIAMLAL SALAILFLPR QWQVSVVENV NEDHIRTASW LFPLYLLVIN
LFVLPVALAG LLFFGDEIPG DDYVLALPLA VDQGLLGLLV YIGGFSAATG MVIVATIAVA
IMVSNDIVTP ALLRLRRFHA RGRHDLSRLI VTIRRLVICA ILALGYAYYL LIADTHALVS
IGLISFAAVA QFAPAVLLGL FWKGASRRGA LAGLVAGFLL WAYTLLLPSL AEAGLLGERL
LTDGPWGIEW LHPYGLFGME GMDPIAHAFF WTLLANLGLL LGVSLFDRQG DMERIQATLF
VDVFLRSERD ARFWEGTATV GDLQDLLGRF LGPERAAGVI REYGAHRGRP LDEAEQAQPE
LVNQVERLLA GSIGSASARV MVASIVKGEA LSYEGVMEIL DATSRAIEYS RRLEEKSHAL
ESATEELRAA NERLKELDQL KDEFVSMVSH ELRTPLTSIR AFGEILLNNP EMDADQRREF
LEVVVRESER LTRLINQVLD LSKIESGSAQ WQLEDVDLSR LAREAAESTQ QLFTDRQTQL
HIEIASDDNA IKGDPDRLMQ LIINLLSNAA KFTEPGEGQV WLRLEKGRGD TLRLSVTDNG
PGISAEDQRR IFDKFHQISQ QQAGKPKGSG LGLAICRLIA DAHWGTLWVD SEPGAGASFV
CKLPRAGGEH CNVTGYVAFS ERGPAPPEEE PS
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