| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1897 |
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| Symbol | |
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| ID | 4710828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2087948 |
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| End bp | 2088547 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639856370 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001003463 |
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| Protein GI | 121998676 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGA TTACCGAGCG GGGGTACCGG ACCTGGGTGG CCATCGCCAT CGTGGCGGCG
CTCCTGCCGC TGGGCTACGC CCTGTATCAG GGGGTGGCAC CGGATCGGGG GCCGGGCGAT
GTCAAGACCA TCGCCGGCGA TCGCGCCCTC CAGGATCGGC GCTACGATCG CGCCCTGGAG
CAGTACACCC GGGCGCTGGA GGAGGCGCCG GAGCACCGTT ACGCTCACCT GGGCAAGGCC
ACGACGCTGC TTGAGCTAGG CGAGCTGGAA CGCGCCATCC ACGTGTACGA CCGGTTCATC
GAACTGATCG ATCCGGAGTT CGCCGGCGCC TACGCCAACC GCGGGATCGC CTACGACCGG
CTCGGTGAAC ACGAGCAGGC GCTTGCGGAC TACCGTAAGG CGGCGGAACT GGACGAGGCG
GTGGATGACG GCCCGGGGTG GTTGACCCGC TTCTTCCACA TGGGACCGGA CGGCCAGCCG
AGCATCTCGG AACGCGCTGA CTACCTCGAG GAGCAGCTGG CGCTGCCGGA AGATGAGCGT
AAGCTCTCCG ACCCGGAAAA AGACAGCCAG CAGAGGGCCT ACACCCAGCG CCCCGATTAG
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| Protein sequence | MIKITERGYR TWVAIAIVAA LLPLGYALYQ GVAPDRGPGD VKTIAGDRAL QDRRYDRALE
QYTRALEEAP EHRYAHLGKA TTLLELGELE RAIHVYDRFI ELIDPEFAGA YANRGIAYDR
LGEHEQALAD YRKAAELDEA VDDGPGWLTR FFHMGPDGQP SISERADYLE EQLALPEDER
KLSDPEKDSQ QRAYTQRPD
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