Gene Hhal_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1888 
Symbol 
ID4710698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2073682 
End bp2074164 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content68% 
IMG OID639856361 
Producthypothetical protein 
Protein accessionYP_001003454 
Protein GI121998667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGAT CACAGTGGCA CTGGCTGATC CTCCCGCTCG GTCTGGTCCT CGCTTCCGCG 
GCGTCGGGGG AGGATTTGCT CTTCGTCCAG AGTGAGCAGG GCGAGGTCTA CGCCGAGGCA
AGCCTGGATG CCGAGGTGGT GAGGCGGGTC CCCCGCGGCA CGGAACTGGA ACAGCTGGCC
TCCGAGGGGG TGTGGTATCG GGTGCGTCAC GACGGGGAAG AGGGCTGGGT GTCGCGCCTG
GTGGTTGCCA CGCAGCCGCC TATGGAGCGG GACAGCATCC TCGATGGTGA GGCGCCGGAT
ATCGACGACT CACGCCGCCG CTCGTCGGAG GTGGCCAGTG CCGCTGCGGC CCGTGGCCTG
ACCCCGGAGC AGCGCGAGCG CCTGAGTGAC CGCGACATGG CGGACTATCG GGCGCTGGCC
GAACTGGAAG AGCAGGCGGT GGATGAAGAC GAACTCCGCG CCTTTCGGGA GGCGTTGCGA
TGA
 
Protein sequence
MRRSQWHWLI LPLGLVLASA ASGEDLLFVQ SEQGEVYAEA SLDAEVVRRV PRGTELEQLA 
SEGVWYRVRH DGEEGWVSRL VVATQPPMER DSILDGEAPD IDDSRRRSSE VASAAAARGL
TPEQRERLSD RDMADYRALA ELEEQAVDED ELRAFREALR