| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1880 |
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| Symbol | |
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| ID | 4710873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2058614 |
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| End bp | 2062111 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639856353 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001003446 |
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| Protein GI | 121998659 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTCA AGCGGATCAA ACTCGCCGGC TTCAAGTCCT TCGTGGACCC GACCTCCGTG
CCCCTGCCGG GGCGCATGGT CGCCGTGGTG GGGCCCAACG GCTGCGGCAA GTCCAACATC
ATCGACGCCG TGCGCTGGGT CATGGGCGAG AGCTCGGCCA AGCACCTGCG CGGCGAGTCC
ATGACCGACG TCATCTTCAG CGGCTCCAGC GCCCGCTCGC CGGTTGGCAA GGCCAGCATC
GAGCTCGTCT TCGACAACAG TGATGGCGCC ATCGGCGGGC AGTACGCCGC CTACAACGAG
ATCTCGGTGA AGCGACAGGT CAACCGCGAG GGGCAGTCGC AGTATTCCCT TAACGGCACC
CGCTGCCGGC GCCGCGACAT CTCCGATGTC TTCATGGGCA CCGGGCTGCG GCCGCGCGGC
TACACCATCA TCGAGCAGGG CATGATCTCG CGGGTGATCG AGTCCCGCCC CGAGGAGCTG
CGCGTCTACC TCGAGGAGGC GGCGGGGATC TCCGTCTACA AGGAGCGGCG GCGGGAGACC
GAGCGGCGCA TCCGGGATAC CCGCGAGAAC CTGGAACGCC TCGAGGATGT CCGGGACGAG
GTCCACAAGC AGCTCGAGAA GCTGCGTCGC CAGGCCGAGA CCGCCGAGCG CTACCGGACG
TACAAGGCCG AGGAGCGGCG ACTGCGCGGC GAACTCTCAC TGCTGCGCCT GCGCGATCTG
GATCAGCGCA TCGGCGAGCG CGACGCCAGT ATCCGTGATC AGGAAAATCA GCGCGAGGCC
GCGGTGGCGG AGCAGCGCCG CGCCGAGCGC GAGATCGAGG CCCTGCGCGA GTCCGCCCGC
GAGCGCCACG AGGCCCTGAA TACCATCCAG GGTCGCTACT ACGAGATCGG CGCCGAGATC
GCCTCCGTGG ACGAGCGGAT TCAGAGCGCC CGCGACCTGC GCCGGCGGCG TGAAGAGGAG
CTGGCCGAGG CGAGTCGCGC ACTCGAGGAG CTCGATGGCA CCGTCACCGC CGACCAGGAG
AAACGGGCCG TCCTTGAGGA GCGGGTCGAG GAGCTGGAGC CCGCCCTGGA GGCGGCCAGC
GAAGAGGAGC AGGTGGCTGA ATCGGCCCAG GAGGACGCCC GCGGGCGCCT CGACGCCTGG
CGCGACGAGG CCGATTCGGT CCGCAGCGAG CAGACCGCGG CGCAGCGCCG CGAGGAAGTG
GAGCGGACCC GTCACGATGC AGCCGCCCGG CGTGTCCGTG AGCTCGATGA GCGCATCGAG
GCCCTCGACG ATGAGCACGA GTCGGTGGAC CTGCATGCCC TGGAGAGCGC CATCAGCGAG
CTGGAGGCGG AGGAGGAGCA GCTCTCCGCC GAGCTCGAGG ATCTGCAGCA GCGCCGCGAT
GCCGCCGCCG AGGAGCTGGA GACCCGGGCC GCCGAGCGGG ACCAGGTGGC CCAGGAGCTG
GAGGCGGCGC GTGAGGCCGT CTCCGGGACC CGCGCCCGGC TCACGTCCCT GGAAACCCTT
CAGGAGTCGG CCCTGGGGCG ACGCGGGGAT GAGCGTCACG CCTGGCTCGA ACGACGGGGT
TGGGCCGGCG CACCGCGCCT GGCCGAGACC GTGCGCGTGG ATGAGGGTTG GCAGCGCGCG
GTGGAGGCGA TCCTCGGCGA CGCCCTGCAG GGTGTCTGCA TTGAGCCGCA CTCGCTGCCC
AGCGAAGGGG CGCCGGACGG CGGACCGCTG ACCCTGGTCG GCGATGCCCA GCAGCTGCCC
GCACCGGAGG AGGACCGCCT GGCGGCGCGT GTGCACGGCA GTGAGGCGGC CCGTGAGCTG
CTGGCCGGGA TCCGCTGCGC CGCGGATGCT GCTGCCGCGG AGGCGCTGCG CCCCGGTCTG
GCCGCCGGCG AGACCGTGGT CACCCCGGAC GGGGTCTGGA TGGGCGCCAA CTGGGTGCGC
CTGCCGGGGC AGGAGGATGC CGAGAGCGGC GTGCTCGAGC GCGAGCAGGA GATCCAGACC
CTGCGCGAAG AGGTGGAGGC CGCCGAGGCG CGGGTCCAGG AGGCCGAGGG ACGGCTGGCC
GACGCGCGGG GTGGCGCTGC CGAGGCCGAG CGCCGCCGCG ACGAGTTGGC CGCCGAACTG
GGGCCGTTGC ACCGCCGCCA CGCCGATCTG CAGGCGCGTC TGGAGCACCG TCGGGAGGCG
CTGGACCGGG CCCGGGCGCG GCGCGAGGAG CTGGCCAGCG AACGCAGCCG GTTGGTCGAG
CAGCGTGATG CCGCCCGCGA GGAGCAGGAA GAGGCCGCCG CCGCTGCCGA GGAGGCGGCC
GCCGGCGCCG CCACCGCCGC CGAGCGGGCC GCCGAGGTGG AGGCGCAGCA GCAGGATCAG
CGTGAGCAGC TGGAGCGGGC CGGCGAGCGT CTGCGCGAGG CGCGTGAGCG CCGCTACGAC
CTCTCCGGCA AGCTCGAGAG CGCCCGCACG GCCCTGGAAT CCGTGCGCGA GCAGTTGCGC
CGAGCCGAGG AGCAGCGCGA GCGCTACGCC CGTCGTCGGG AGGAGTTGGC GAGCGCCCTG
GCCGGGGACG AAGACCCGGT GGCCGAGCTG ACCGAGAAGC GCGAAACCCT GCTGGCCCGC
CGTTCCGAGG CGGAGACGCA GCTGGCCGAG GCGCGCAGCC AGGCCGAGCA CTTGGATCAC
CAGCTGCGCG AGCAGGAGCA GGCGCGCACC GAGGCCGAGC AGCGCGCCGA GCGGCTGCGC
GAGGGACTGG AGGCGCTGCG CCTGGAGACC GGTGAGCTAC GGGTCCACCG CAGCCACGAA
GCCGACGCCC TGGCCGAGCT CGGCGAGTCG GAGGCCGACG TGGCCGAGCG GTTGGCCGAG
GACGCCACCG TGGATGCCTG GGAGAAGGCG CTGGAGCAGA CCACCGAGCG CATCCGCCGG
TTGGGGTCGG TGAACCTGGC GGCCATCGAC GAGTGCCAGC AGCTGGAGGA GCGCCGCGGC
TATCTGGATG AGCAGCACGC CGACCTCAAC GAGGCCCTGG AGACCCTGGA GACGGCGATT
CGCCGCATCG ACCGGGAGAC CCGCGCGCGG TTTCGTGAGA CCTTCGATCA GGTGAACGAG
GGCCTGGGCC GCTTCTTTCC GCGGCTGTTC GGGGGCGGGC GCGCCTACCT GGAACTGACC
GACGACGACC TGCTGTCTAC CGGGGTGGTG GTCATGGCGC AGCCGCCGGG TAAACGGGTA
TCGAGCATCC ATCTGCTCTC CGGCGGCGAG AAGGCGCTGA CCGCGGTCGC GCTGGTCTTT
GCCATCTTCA ACCTCAACCC GGCGCCGTTC TGCCTCCTCG ATGAGGTGGA CGCCCCGCTC
GACGAGGCCA ACGTCGGCCG CTTCTGCGAC CTGGTCGAGG AGATGTCGGA GAAGGTCCAG
TTCGTGCTGA TCACCCACAA CCGGACCACC ATGGAGCGCG CCTCCCATCT GCTCGGTGTC
ACCATGAATG AGCCCGGCGT CTCGCGACTG GTGGCGGTGG ATGTGGACGA GGCGCTCGAT
ATCGCCGAGC CCGGATAA
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| Protein sequence | MHLKRIKLAG FKSFVDPTSV PLPGRMVAVV GPNGCGKSNI IDAVRWVMGE SSAKHLRGES
MTDVIFSGSS ARSPVGKASI ELVFDNSDGA IGGQYAAYNE ISVKRQVNRE GQSQYSLNGT
RCRRRDISDV FMGTGLRPRG YTIIEQGMIS RVIESRPEEL RVYLEEAAGI SVYKERRRET
ERRIRDTREN LERLEDVRDE VHKQLEKLRR QAETAERYRT YKAEERRLRG ELSLLRLRDL
DQRIGERDAS IRDQENQREA AVAEQRRAER EIEALRESAR ERHEALNTIQ GRYYEIGAEI
ASVDERIQSA RDLRRRREEE LAEASRALEE LDGTVTADQE KRAVLEERVE ELEPALEAAS
EEEQVAESAQ EDARGRLDAW RDEADSVRSE QTAAQRREEV ERTRHDAAAR RVRELDERIE
ALDDEHESVD LHALESAISE LEAEEEQLSA ELEDLQQRRD AAAEELETRA AERDQVAQEL
EAAREAVSGT RARLTSLETL QESALGRRGD ERHAWLERRG WAGAPRLAET VRVDEGWQRA
VEAILGDALQ GVCIEPHSLP SEGAPDGGPL TLVGDAQQLP APEEDRLAAR VHGSEAAREL
LAGIRCAADA AAAEALRPGL AAGETVVTPD GVWMGANWVR LPGQEDAESG VLEREQEIQT
LREEVEAAEA RVQEAEGRLA DARGGAAEAE RRRDELAAEL GPLHRRHADL QARLEHRREA
LDRARARREE LASERSRLVE QRDAAREEQE EAAAAAEEAA AGAATAAERA AEVEAQQQDQ
REQLERAGER LREARERRYD LSGKLESART ALESVREQLR RAEEQRERYA RRREELASAL
AGDEDPVAEL TEKRETLLAR RSEAETQLAE ARSQAEHLDH QLREQEQART EAEQRAERLR
EGLEALRLET GELRVHRSHE ADALAELGES EADVAERLAE DATVDAWEKA LEQTTERIRR
LGSVNLAAID ECQQLEERRG YLDEQHADLN EALETLETAI RRIDRETRAR FRETFDQVNE
GLGRFFPRLF GGGRAYLELT DDDLLSTGVV VMAQPPGKRV SSIHLLSGGE KALTAVALVF
AIFNLNPAPF CLLDEVDAPL DEANVGRFCD LVEEMSEKVQ FVLITHNRTT MERASHLLGV
TMNEPGVSRL VAVDVDEALD IAEPG
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