Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1872 |
Symbol | |
ID | 4711177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2046332 |
End bp | 2046934 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639856344 |
Product | AMMECR1 domain-containing protein |
Protein accession | YP_001003438 |
Protein GI | 121998651 |
COG category | [S] Function unknown |
COG ID | [COG2078] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCCA CTGAGCAGGA ACCGATCGGC ACTGATCTAC CGGCGGAGCA CGGGGCCCTC CTGCCCCGCT TCGCCCGGCA GAACATCGCC CACCAGCACG AGGTGGGCGA GCCACTGCCC ATCGCCTCTG GGCTGCCGGA GAGCCTCACC CGTCCCGGCG CAGCCTTCGT CTCGCTCCAC CATGACGACG GCCTGCGCGG CTGCATGGGC ACCTTGCTCC CCAAGCGCCC GCTGGTGAAC AGCGTCATGG ACTCGGCCCT GGACGCCGCC TTCAACGACC CGCGCTTCGA GGCGGTCGGC CGCGATGAGT TGAACGCGCT GACCGTCAAG GTCGCCGTCC TCGGCCCGGC GCGGCCCCTG GAGGTGTCGG ACGAACAACA ACTGCTGGCC GAGCTGGTCC CCGGCGAGGA CGGCCTGATC CTCCACGACG GCCTGCGCCG CGCCACCTTC CTGCCGGCGG TCTGGGAGGC CCTGCCGGAG CCACAGGACT TCCTCATCCA GCTCAAGCTC AAGGCCGGCC TGCCGCCGGA TCACTGGTCC GAGAACATTC AGTTCGCCCG CTACCGCTCG GTCACCTTCA CTGACCCACC GCGCGGCGGC TGA
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Protein sequence | MSSTEQEPIG TDLPAEHGAL LPRFARQNIA HQHEVGEPLP IASGLPESLT RPGAAFVSLH HDDGLRGCMG TLLPKRPLVN SVMDSALDAA FNDPRFEAVG RDELNALTVK VAVLGPARPL EVSDEQQLLA ELVPGEDGLI LHDGLRRATF LPAVWEALPE PQDFLIQLKL KAGLPPDHWS ENIQFARYRS VTFTDPPRGG
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