Gene Hhal_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1872 
Symbol 
ID4711177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2046332 
End bp2046934 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content70% 
IMG OID639856344 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_001003438 
Protein GI121998651 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCCA CTGAGCAGGA ACCGATCGGC ACTGATCTAC CGGCGGAGCA CGGGGCCCTC 
CTGCCCCGCT TCGCCCGGCA GAACATCGCC CACCAGCACG AGGTGGGCGA GCCACTGCCC
ATCGCCTCTG GGCTGCCGGA GAGCCTCACC CGTCCCGGCG CAGCCTTCGT CTCGCTCCAC
CATGACGACG GCCTGCGCGG CTGCATGGGC ACCTTGCTCC CCAAGCGCCC GCTGGTGAAC
AGCGTCATGG ACTCGGCCCT GGACGCCGCC TTCAACGACC CGCGCTTCGA GGCGGTCGGC
CGCGATGAGT TGAACGCGCT GACCGTCAAG GTCGCCGTCC TCGGCCCGGC GCGGCCCCTG
GAGGTGTCGG ACGAACAACA ACTGCTGGCC GAGCTGGTCC CCGGCGAGGA CGGCCTGATC
CTCCACGACG GCCTGCGCCG CGCCACCTTC CTGCCGGCGG TCTGGGAGGC CCTGCCGGAG
CCACAGGACT TCCTCATCCA GCTCAAGCTC AAGGCCGGCC TGCCGCCGGA TCACTGGTCC
GAGAACATTC AGTTCGCCCG CTACCGCTCG GTCACCTTCA CTGACCCACC GCGCGGCGGC
TGA
 
Protein sequence
MSSTEQEPIG TDLPAEHGAL LPRFARQNIA HQHEVGEPLP IASGLPESLT RPGAAFVSLH 
HDDGLRGCMG TLLPKRPLVN SVMDSALDAA FNDPRFEAVG RDELNALTVK VAVLGPARPL
EVSDEQQLLA ELVPGEDGLI LHDGLRRATF LPAVWEALPE PQDFLIQLKL KAGLPPDHWS
ENIQFARYRS VTFTDPPRGG