Gene Hhal_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1871 
Symbol 
ID4711176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2045539 
End bp2046345 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content71% 
IMG OID639856343 
Producthypothetical protein 
Protein accessionYP_001003437 
Protein GI121998650 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAGA CCACGCCCAA GGTTCGGCCG CCCGCCGTCG CCGGGCGCTT CTACCCCGGC 
GAGGCCGAGA CCCTGCGACG GGCCGTCCGG GAGCTCCTGG CCGAGGCCGG GGAGCCGGAA
CGGGATCCGA CCCGAGCGCC CCACGCCATG GTGCTCCCCC ACGCCGGCTA CCCCTTCTCG
GGCGCTGCGG CGGCCCGGGG CTATCAGCGC ATCGTGCCAA TCCGCGAGCA GCTTCGGCAC
GTGGTGTTGC TCGGCCCGGC GCACTTCGTC GATCTAAGCG GCATCGCACT GCCCGCAGCC
GACGCCCTGG CCACCCCGCT GGGGACAGTG CCGGTCAGTG CGACGCTGCG TGAGCGGGCA
TTGGAACACC CCGGCGTCCA CATCGACGAC TCGGCCCACG AGCGCGAGCA CAGCCTCGAG
GTCCACCTGC CCTTCCTGCA GACCCTGCTC GACGACTTCG ACGTCCTGCC GCTGGTGGTC
GGCCGGGGCC CGGCGGAATC CTGTGGACGC CTGATCGAAC AACTCTGGCA GGACGATACC
CTGGTGGTGG TCAGCTCGGA CCTGAGCCAC TTCCACGACG ACCCCACCGC TCGGCGGCTC
GACGCCGAGA CCACCGCCGC CATCGAGGCC GGCACCTTCG AGCAGATCAC CCCGGAGCGG
GCCTGCGGTG CCGCGCCCCT GCGCGGCCTG CTCTGGTTCG CGCGCAAGCA CGGGCTGCAG
ACGCAGGCCA TCGCCCAGTG CAACTCCGGC GACGTCACCG GGGATCGCTC CTCCGTCGTA
GGGTACGGCA GTTATGTCGT CCACTGA
 
Protein sequence
MHETTPKVRP PAVAGRFYPG EAETLRRAVR ELLAEAGEPE RDPTRAPHAM VLPHAGYPFS 
GAAAARGYQR IVPIREQLRH VVLLGPAHFV DLSGIALPAA DALATPLGTV PVSATLRERA
LEHPGVHIDD SAHEREHSLE VHLPFLQTLL DDFDVLPLVV GRGPAESCGR LIEQLWQDDT
LVVVSSDLSH FHDDPTARRL DAETTAAIEA GTFEQITPER ACGAAPLRGL LWFARKHGLQ
TQAIAQCNSG DVTGDRSSVV GYGSYVVH