| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1862 |
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| Symbol | |
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| ID | 4711231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2035584 |
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| End bp | 2036465 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639856334 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001003428 |
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| Protein GI | 121998641 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.23265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTCA GGCAGATCCT TTTCGCCAGT GATCTCTCGC CGCAGGCGGC GCTGGCCGGC
GAGCGGGCCG CGCAGCTGGC CGGAGAGACC GGAGCAGGCC TTGGAGCGGT CTACGTCATC
GACAGTGATA TCCCCGCGGA GAGTGCCGAT GGGCAACCCC GTGCCGCCGT CCGGCAGACA
GCCGAGGCGG AGTTGCAGAA CACGACTCCC GGGCAGTCAG CGTCGCTCCA GGTGCGTTTC
GGCAATGTCC TCGGTGAGCT GGCCCAGGCC ATCGAGGAGG AGCAGGCCGA GCTGCTGGTC
GTCGGGGCCC ACGGCCAGCA CTATGCGGCT GACTGGTTAC TGGGGACCTC CGCCGAGCAG
TTCGTCCGTC ACCTGCCTGT CCCGACCCTG GTGGTCCGTA ATCCGGCAGA GCATCCTTAT
CGGCGTATCC TGGTGGCCAC CGACTTCTCG GCCTGCGCCC GTGCGGCCCT GCAGCGGGTG
GCCACCTGGT TCCCGGAGGC GGAACTGGAA GTGGTGCATG TCCTGGATAC CCAGGCACTG
GAGCAGATGC GGGCAGCGGG CGTGGGCGAG CGCTGGGTCG AACAGCGGTA TGAGCGTCAG
CGTGCTGCGG CCGAGTCGCG ACTGCGCGAG GAGTTGACCG CCTGTGGATT GGGTCCGGGG
CGGGTCACCG AGACCCTGCT CGCCGGCTAT CCGGCGGAGG CGCTGCTTGG GCGCGTGCGA
ACCGGACAGC CGCCCGATCT GGTGGTATTG GGCAACCACG GGCGCGGGCG CTGGGGCGAT
TTGCTGCTTG GGAGTGTCGC CAGCCGCGTT TTGCACCAGA CCAGCAGGGA CTTGATGCTG
GTTCGTAGCG GCGAGACTTC GGGGGCTCCC ACGGTCGGAT AA
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| Protein sequence | MSLRQILFAS DLSPQAALAG ERAAQLAGET GAGLGAVYVI DSDIPAESAD GQPRAAVRQT
AEAELQNTTP GQSASLQVRF GNVLGELAQA IEEEQAELLV VGAHGQHYAA DWLLGTSAEQ
FVRHLPVPTL VVRNPAEHPY RRILVATDFS ACARAALQRV ATWFPEAELE VVHVLDTQAL
EQMRAAGVGE RWVEQRYERQ RAAAESRLRE ELTACGLGPG RVTETLLAGY PAEALLGRVR
TGQPPDLVVL GNHGRGRWGD LLLGSVASRV LHQTSRDLML VRSGETSGAP TVG
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