Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1852 |
Symbol | |
ID | 4711269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2024066 |
End bp | 2025421 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639856324 |
Product | uncharacterized membrane-anchored protein |
Protein accession | YP_001003418 |
Protein GI | 121998631 |
COG category | [S] Function unknown |
COG ID | [COG4949] Uncharacterized membrane-anchored protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGAGAA AGCCAGCCAG CATGACCCTG AACGTAACGG AAAGGCATCA GGCCAGTGAG CCCGTCCTGG GCGCGTATAA CGATCACCCC CTGCGCCTGG AGGTCAACGA CGAGATCCAC GCCCGTCCCT ACGAGCGGCT GCGGGCGCCG GCGCGGGTCA GCCACCTGGG GATGTTCTCC GGGCGCCACT CCGCCGATGC CGATCGGGCG GCAGTGGCCG ATCTCTGCGA GCGCTTCGGG GTGGAGCCGC CGGAGCCGGA TGCCCAGCAC ATGTCCCGCG ACTTCGGGCC CTTCCGACTG AAGTGGGAGC GGCGCACCGA GGTCTCGACC TACACCTTCA TCGTCGAAGA CGACTTCGAG CACCCCTTCG AAGGGCCGCC GATCGAGCGG GTGCCCGAGG ATTGGCTGGC CAGTCTGCCC GGGCCGCGGC TGGTGGGTAT CCACCTCGCC CTGGAACCGT CCTGGTCGCA GCCACGGACC AGCAGCGGGA TCGTGGCGCT GTTCAACGAC AACACCATCG TCGGCAGCCA GATCGCCGGC GGCGCAGCGC GGGTCTGGAC CGACTTCCGA ATCCACGAAG ACGGTTTCTC GCGCATCCTT CTGCGCGATG TGAACATGCG CGAGCGCCAG GCGGGCCGTG CCATCCAGCG CCTGCTGGAG ATCGAGACCT ATCGCATGAT GGCGCTGCTC GCCTTTCCCG TGGCGCGACG CCTCAACCCG CAGCTCAATG AGCTCGAGGA GCAGCTCGCG AGCATTACCG AGCGCATGAC CGGTTCAACC CGGGAGCGTG ACGAGCAGAA CCTGCTCAGC CAGCTGATGG AGCTGGCCGC GCAGGTTGAG CGTATCGGCA ACAACACCAA CTACCGGTTT CACGCCGCGC GCGCCTACCA CGAGCTGGTC GAGCGGCGCA TTCAGGAGCT GCGCGAGCAG CGTATCCAGG GGGTGCAGAC CATCCAGGAG TTTATGGAGC GCCGCCTGGT TCCGGCCATG CGTACCTGCG ATACGGTGGC CGAGCGGCGA GGGTCGCTCT CCGAGCGCAT CTCGCGCACC GGCGACCTAC TGCGCACCCG GATCGACGTC GCCCTGGAGG CGCAGAACCG GGATCTGCTC GACTCCATGG ATCGCCGCGC TAAGCTGCAG TTTCGCTTGC AGGAGACCGT CGAGGGGCTC TCCGTGGCGG CCATCAGTTA CTACCTGATG GGCCTGATCA GCTATGTGTT GCAGGCGGCG CGGGACGCCG GCGCGCCCGT CCGCGTGGAG ATCACCCAGG GCCTGGCGGT GCCGGTGGTG GTCTTCACCA TCTGGTTGGT GGTGCGCTTG GTGCGCTACC GCATCGCCAA GCGCCAGGAG GGGTAG
|
Protein sequence | MQRKPASMTL NVTERHQASE PVLGAYNDHP LRLEVNDEIH ARPYERLRAP ARVSHLGMFS GRHSADADRA AVADLCERFG VEPPEPDAQH MSRDFGPFRL KWERRTEVST YTFIVEDDFE HPFEGPPIER VPEDWLASLP GPRLVGIHLA LEPSWSQPRT SSGIVALFND NTIVGSQIAG GAARVWTDFR IHEDGFSRIL LRDVNMRERQ AGRAIQRLLE IETYRMMALL AFPVARRLNP QLNELEEQLA SITERMTGST RERDEQNLLS QLMELAAQVE RIGNNTNYRF HAARAYHELV ERRIQELREQ RIQGVQTIQE FMERRLVPAM RTCDTVAERR GSLSERISRT GDLLRTRIDV ALEAQNRDLL DSMDRRAKLQ FRLQETVEGL SVAAISYYLM GLISYVLQAA RDAGAPVRVE ITQGLAVPVV VFTIWLVVRL VRYRIAKRQE G
|
| |