Gene Hhal_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1842 
Symbol 
ID4711375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp2014707 
End bp2015333 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID639856313 
Productputative ABC-type uncharacterized transport system 
Protein accessionYP_001003408 
Protein GI121998621 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACACGC GCCGCCCGAC CCACCTCGGC ACACTACTGA TCCTGCTCGC CGCCACGATA 
CTGAGCGCCT GCACCCTGCT CCCCGAAGCG GAGACCTACA CCGCCTACCA GCTGCCTCCG 
CCCGAAGGCG ACGCTCCCGC CGCCGACACC GAGCCAGTGG ACTGGACGCT GCGCGTGACC 
ACACCGAGCA GCAGCGACCT GCTTGCCGGC AATCGCATCG CCGTGGCGAC CGGCGAGCAC 
CGCATGAGCA CCTTCGCTGG CGCACGCTGG GTCTCTCCCC TGCCACGACT CTGGCAGGAG 
CACCTGATCG AAACCTTCTA CGCCGATGGT CGAATCCACC GCCTGAGCGC CGACGGCGAA 
CGCCTCTCGG CCGACCTGGA GCTGCGCACG ACCCTGCGCG CGTTCCAGAT CGAGACCCGC 
GACGAAGGCC CCCGGGCGCG GGTGGTGGTG GACGCCCGCC TGGTCGATGT CGGGCAGCGG 
CGGATCGTCG CCACCGAACG CTTCGCGGCC ACACGCGACG TCGCGTCCGA CGACACAGAC 
GCCGCGGTCG CGGCGCTCGG CGCCGCCAAT CGGTCGGTCG GCCGCGAACT GGTGGCGTGG 
ACCGTGACCG CCGCGGCCGA GGACTAG
 
Protein sequence
MNTRRPTHLG TLLILLAATI LSACTLLPEA ETYTAYQLPP PEGDAPAADT EPVDWTLRVT 
TPSSSDLLAG NRIAVATGEH RMSTFAGARW VSPLPRLWQE HLIETFYADG RIHRLSADGE 
RLSADLELRT TLRAFQIETR DEGPRARVVV DARLVDVGQR RIVATERFAA TRDVASDDTD 
AAVAALGAAN RSVGRELVAW TVTAAAED