Gene Hhal_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1841 
Symbol 
ID4711374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2013769 
End bp2014710 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content70% 
IMG OID639856312 
Producthypothetical protein 
Protein accessionYP_001003407 
Protein GI121998620 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCC GGGCGCGGCA TTTCTGGATC GGGCTGGCCA CGCTGGCCAT GATCCTGGGC 
GGAATCCTCT TCGGGGTCTG GCTCACCGAC TCGGATCTCT ATGGTGAACG CCAGCGCTTC
GAGATCGTCT TCGACGAGGA TGTCGGCGGC CTGTCACCGC GCAGCCCGGT CAAGTTCAAC
GGGATCAACG TCGGCGAGAT CGACCACCTG GGCCTCGACC CGGACAACCC GGGCCGTGTC
ATCGCGCGCA TCACCGTCAG CGGAGAGACC CCGGTCCGGA CCGACACGCG GGCACAGATC
GGCAGCTCGA GCCTGTTCGC CGGAGGCGCC CACATCCGGC TCAAGCCCGG CGACCCCGAC
GCACCGCCGC TGGAGCCCCC CGAACAAGGG CTGGCGCGGA TCGAGACCGA ATCCTCCCCG
ATGGCCCGGC TGCGCGAGGA CAGCGACCAA TTGCTCGCCG GCATCAACAA CCTGGTGGAG
ACGGCGAACC AGCTGCTGTC AGCTGAGAAC CTCGACACCC TGACCGCCAC CCTGAACCAC
CTGGAACAGA CCACCGGGGC CGTGGCGGCG CGCCGCGACG ACCTGGGCCG GGGCATCACC
GCCCTGGCCG ACGGCGGCGA GCAGGCCGAA CGCACCCTGC AGGAGGCGCA ACAGCTCGTG
AAGGAGGTGC GCGGACTCCT GGATGGCCCC GGCCGTGAGA TTCTGCACAG CACCGCCCGG
GCGACCGAAG CGCTGGAGGG CAGCAGTCGC GAGGCGCAGG AGCTGTTCCG GGACAACCGC
GAGGCCGTCG AGCGCGGGCT GCAGAGCCTG CAGGACCTGG AACCGCTGAG TGAGGAACTG
CAGCGGACCC TCGGCGATCT GCGCAGCCTG CTCCGGCGCC TGGGGCAAGA CCCCGGCGGG
CAGTTGCTAC GCCGCGAGCA GATGGAGGAG TACCAGCCGT GA
 
Protein sequence
METRARHFWI GLATLAMILG GILFGVWLTD SDLYGERQRF EIVFDEDVGG LSPRSPVKFN 
GINVGEIDHL GLDPDNPGRV IARITVSGET PVRTDTRAQI GSSSLFAGGA HIRLKPGDPD
APPLEPPEQG LARIETESSP MARLREDSDQ LLAGINNLVE TANQLLSAEN LDTLTATLNH
LEQTTGAVAA RRDDLGRGIT ALADGGEQAE RTLQEAQQLV KEVRGLLDGP GREILHSTAR
ATEALEGSSR EAQELFRDNR EAVERGLQSL QDLEPLSEEL QRTLGDLRSL LRRLGQDPGG
QLLRREQMEE YQP