Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1840 |
Symbol | |
ID | 4711381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2012977 |
End bp | 2013768 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639856311 |
Product | ABC transporter related |
Protein accession | YP_001003406 |
Protein GI | 121998619 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAACG GGGGCAATCG CACCGACACG CTGCCGGCGA TCCGGGTTCG CGGGCTGGTG ACCCGACTCG GCGGGCAAAC CATTCACGAC GGCCTCGACC TGGACGTCCG CCGGGGCGAA GTCCTCGGCC TGGTGGGCGG CTCGGGCAGC GGCAAATCGG TCCTTCTCCG CACGCTCGTT GGGCTTTTGC GCCCGGCCGA GGGGCACATC CAGATCCACG GCCAATCGAT CGACAGGCTG GGACAGGCCG CAGGCCTGGA GCGCCGCATC GGGGTGCTGT TTCAGCACGG CGCCCTCTAC TCGTCGCTGA CCATCACCGA GAACGTCGCC CTCGCCCTGA TCGAACACGC CGGCCTGACC CGCGCCGAGG CCGAAGACCT CGCCCGGGTC AAGCTGGCAC TAACCGGTCT CGACCCGGCG GCGGGCCCGC GCTACCCCGC GGAACTCTCC GGCGGCATGG TTAAGCGCGC GGCGCTCGCC CGCGCGCTGT CCCTCTGCCC GGAAGTGCTC TTCCTCGACG AACCAACCGC CGGCCTCGAC CCCATCAGCG CCGCCGCCTT TGACCGGCTG CTGGTCACCC TGCGCGACGC CCTGAACCTG ACGGTGTTCC TGGTCACCCA CGATCTCGAC ACCCTCTACG CCACCTGCGA CCGCGTTGCC GTCCTCGCCC ATAAGCAGGT CCTGGCGACC GGCACGCTTG AGGAAGTGAG CGCCATCGAC GACGATTGGG TACAGGCCTA TTTCCACGGT GAGCGTGGGC GCGCGGCCCG CAGCACGCAG GAGAACCGCT GA
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Protein sequence | MVNGGNRTDT LPAIRVRGLV TRLGGQTIHD GLDLDVRRGE VLGLVGGSGS GKSVLLRTLV GLLRPAEGHI QIHGQSIDRL GQAAGLERRI GVLFQHGALY SSLTITENVA LALIEHAGLT RAEAEDLARV KLALTGLDPA AGPRYPAELS GGMVKRAALA RALSLCPEVL FLDEPTAGLD PISAAAFDRL LVTLRDALNL TVFLVTHDLD TLYATCDRVA VLAHKQVLAT GTLEEVSAID DDWVQAYFHG ERGRAARSTQ ENR
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