Gene Hhal_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1840 
Symbol 
ID4711381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2012977 
End bp2013768 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID639856311 
ProductABC transporter related 
Protein accessionYP_001003406 
Protein GI121998619 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAACG GGGGCAATCG CACCGACACG CTGCCGGCGA TCCGGGTTCG CGGGCTGGTG 
ACCCGACTCG GCGGGCAAAC CATTCACGAC GGCCTCGACC TGGACGTCCG CCGGGGCGAA
GTCCTCGGCC TGGTGGGCGG CTCGGGCAGC GGCAAATCGG TCCTTCTCCG CACGCTCGTT
GGGCTTTTGC GCCCGGCCGA GGGGCACATC CAGATCCACG GCCAATCGAT CGACAGGCTG
GGACAGGCCG CAGGCCTGGA GCGCCGCATC GGGGTGCTGT TTCAGCACGG CGCCCTCTAC
TCGTCGCTGA CCATCACCGA GAACGTCGCC CTCGCCCTGA TCGAACACGC CGGCCTGACC
CGCGCCGAGG CCGAAGACCT CGCCCGGGTC AAGCTGGCAC TAACCGGTCT CGACCCGGCG
GCGGGCCCGC GCTACCCCGC GGAACTCTCC GGCGGCATGG TTAAGCGCGC GGCGCTCGCC
CGCGCGCTGT CCCTCTGCCC GGAAGTGCTC TTCCTCGACG AACCAACCGC CGGCCTCGAC
CCCATCAGCG CCGCCGCCTT TGACCGGCTG CTGGTCACCC TGCGCGACGC CCTGAACCTG
ACGGTGTTCC TGGTCACCCA CGATCTCGAC ACCCTCTACG CCACCTGCGA CCGCGTTGCC
GTCCTCGCCC ATAAGCAGGT CCTGGCGACC GGCACGCTTG AGGAAGTGAG CGCCATCGAC
GACGATTGGG TACAGGCCTA TTTCCACGGT GAGCGTGGGC GCGCGGCCCG CAGCACGCAG
GAGAACCGCT GA
 
Protein sequence
MVNGGNRTDT LPAIRVRGLV TRLGGQTIHD GLDLDVRRGE VLGLVGGSGS GKSVLLRTLV 
GLLRPAEGHI QIHGQSIDRL GQAAGLERRI GVLFQHGALY SSLTITENVA LALIEHAGLT
RAEAEDLARV KLALTGLDPA AGPRYPAELS GGMVKRAALA RALSLCPEVL FLDEPTAGLD
PISAAAFDRL LVTLRDALNL TVFLVTHDLD TLYATCDRVA VLAHKQVLAT GTLEEVSAID
DDWVQAYFHG ERGRAARSTQ ENR