Gene Hhal_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1825 
Symbol 
ID4711100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1997606 
End bp1998055 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content70% 
IMG OID639856295 
Producthypothetical protein 
Protein accessionYP_001003391 
Protein GI121998604 
COG category 
COG ID 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCGCC ACTCAGGATT CACACTCCTC GAGGCGCTTG TGGCCCTCGG GCTCTTGGCC 
GGTGTCGCGG CCGTGTCGCT CCTCGCCCTG TACGGCGGGG TGCACGGGGC TCGTGATGCC
GGTTATCACG TCCGGGCGAC CCTCCTTGCC GAAGAGTTGA TCGCCCGTGC CCGGCTGGTC
GCCCCGGATC AGCGCGCCGC TGCCTTGGCC GCGGTCGATG CGGGTGATAT CGACGCGTGC
CAACCGCCGT CGGTCAAGGA TCAGCCCCGT GGCGATGTGG TCGATGCCGA CGGCTGGCGG
GCCGAGGTGG CCTGCCAGCT GCCGCAGGCC GAGGTGTCGG CCGAGGCGGC CGCCGATCGC
ATCCGCGTCG AGCTCCGCTG GCAAGCCCCC CACCGCGACG CGCCATCGTC CCTTGAGCTT
TCCGGGCAAC TCCCTGAGGT CAATCGATGA
 
Protein sequence
MPRHSGFTLL EALVALGLLA GVAAVSLLAL YGGVHGARDA GYHVRATLLA EELIARARLV 
APDQRAAALA AVDAGDIDAC QPPSVKDQPR GDVVDADGWR AEVACQLPQA EVSAEAAADR
IRVELRWQAP HRDAPSSLEL SGQLPEVNR