| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1822 |
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| Symbol | |
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| ID | 4711253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1995810 |
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| End bp | 1996226 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639856292 |
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| Product | type IV pilin |
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| Protein accession | YP_001003388 |
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| Protein GI | 121998601 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0523524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAG TGGGTCAGCG CGTCCGTGTG GCTGGCTTCA GCCTGGTCGA GCTGATGATC
GTACTGGCTA TCCTGGCCAT CCTGGTGGCG ATCGCCTACC CGTTCTACGG CCAGTACAAG
GTGCAGGCGG ATCGCAGCGA TGCCACCGCC ACTCTGCTGG ATACTTGGAT GGCGCTCGAG
CGCTGTTTCA TCCAGGAGAT GAGCTACCAG GCGTGCACAG ATGAGGTCCC GGAGTTGTCC
GAGCGGGGCC TCTATGAACT CGAGATCGAG ACCGACGCCG ATGGCTTTCG CCTGACCGCC
ACACCGGCGC CGGGAAGTCC GCAGGAGGCG GATGAGGCGT GTACGGAATT CACCCTCGAT
CACCGCGGCG AACGGGGCAG TGCCCCCGGG GCCGCGGAGG TCTGCTGGGG CGACTGA
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| Protein sequence | MKRVGQRVRV AGFSLVELMI VLAILAILVA IAYPFYGQYK VQADRSDATA TLLDTWMALE
RCFIQEMSYQ ACTDEVPELS ERGLYELEIE TDADGFRLTA TPAPGSPQEA DEACTEFTLD
HRGERGSAPG AAEVCWGD
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