Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1821 |
Symbol | |
ID | 4711252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1995301 |
End bp | 1995888 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639856291 |
Product | Tfp pilus assembly protein FimT-like protein |
Protein accession | YP_001003387 |
Protein GI | 121998600 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.071899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTACGGAA TTCACCCTCG ATCACCGCGG CGAACGGGGC AGTGCCCCCG GGGCCGCGGA GGTCTGCTGG GGCGACTGAC CCCGGGATTC ACGCTGACCG AGCTGCTGGT GGCGCTCGCC CTGATTGCCG GGCTGACCGC TGTGGCGGCG CCACAGTTGG GTGCCGGTGT GGATGAGGTC CGCGCTTGGG TCTGGCAGCG GGAACTCCTC GCCGGGCTGG AGCGGGCACG CATCGAGGCA CTGGACCAAG GCGAGACGGT CACCTTGTGC GGCGGCACCC CGCAGGCCGG ATGCGATGCG CAGGGCTGGG ACGACGGCTG GATCCTGTTC CGCGGCGAGG CTGCATCCGG CCAGGCGCCG GGACCGGAGC AACTCCTGGC CCGGGGGCGT GGGATCGGGC CGGGTCACCG GGTCGTGTCG GACAGCGGGC GGGAAGACTT CCGGTTTCAG CCTGATGGCT GGCTATCGCG CATTTACGGC GACACCCTGA GGCTTTGTCG CGACGGCGCG GCAGTGGTCG CCATCCGTGT GGCTAGCACC GGCCGGGCAA GAGCGGACAA CGATCAGCGG GGTGAGCCCT GCGATTGA
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Protein sequence | MYGIHPRSPR RTGQCPRGRG GLLGRLTPGF TLTELLVALA LIAGLTAVAA PQLGAGVDEV RAWVWQRELL AGLERARIEA LDQGETVTLC GGTPQAGCDA QGWDDGWILF RGEAASGQAP GPEQLLARGR GIGPGHRVVS DSGREDFRFQ PDGWLSRIYG DTLRLCRDGA AVVAIRVAST GRARADNDQR GEPCD
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