| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1816 |
|---|
| Symbol | |
|---|
| ID | 4710991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1989906 |
|---|
| End bp | 1990649 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639856286 |
|---|
| Product | exsB protein |
|---|
| Protein accession | YP_001003382 |
|---|
| Protein GI | 121998595 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
|---|
| TIGRFAM ID | [TIGR00364] exsB protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.957931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGC GCCCACAGCG GGTACCCGCC AGCACCGAGC AGGAGTCCGC CCTGGTCCTC
TTCTCCGGGG GACAAGATTC CACGGCCTGC CTGGCCTGGG CACTGGAGTA TTTCAGCCGG
GTCGAGACCG TGGGCTTCGC CTACGGCCAG CGTCATGATG TGGAGCTATC GGCCCGCGAG
GAGGTCCTCG ACGGATTGCG CGCCCTCCGC CCCGACTGGG CGGCGCGCCT GGGCAGCGAC
CGTGTGCTGG ATGCCGGCGT GCTGGGCGAG ATCAGCGATA CCGCACTGAC TCAAGATGCC
GAAATCGCCT ACGACGCGCG CGGCCTGCCC ACCACCTTCG TCCCCGGCCG CAACCTGCTC
TTCTTCACGC TGGCAGCAGC CGTGGCCCAC CGGCGCGGCA TCCGCCATCT GGTTGCTGGC
GTCTGCGAGA CCGACTTCTC CGGCTACCCC GACTGCCGCG ACGACACCGT CAAGTCCCTG
CAGGTCACCC TCAACCTGGG CATGGCCGAG CGGCTGGTGC TGCACACCCC ATTGATGTGG
CTGGATAAGG CCCAGACCTG GATGCTGGCC GAACAACTTG GCGGAAGCGC ACTGGTGGAT
TTGACCGTCG AGGCGAGCCA TACGTGTTAT TACGGCATGC GGGAGCAGCG CCACGAATGG
GGCTACGGCT GCGGCGAGTG CCCGGCCTGC CGGCTGCGCG CCGAAGGCTG GCACCGTTTC
CGACACGGCA GCGGCGCACA GTAA
|
|---|
| Protein sequence | MAERPQRVPA STEQESALVL FSGGQDSTAC LAWALEYFSR VETVGFAYGQ RHDVELSARE
EVLDGLRALR PDWAARLGSD RVLDAGVLGE ISDTALTQDA EIAYDARGLP TTFVPGRNLL
FFTLAAAVAH RRGIRHLVAG VCETDFSGYP DCRDDTVKSL QVTLNLGMAE RLVLHTPLMW
LDKAQTWMLA EQLGGSALVD LTVEASHTCY YGMREQRHEW GYGCGECPAC RLRAEGWHRF
RHGSGAQ
|
|---|
| |