| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1806 |
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| Symbol | |
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| ID | 4710989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1977867 |
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| End bp | 1978667 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639856276 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001003372 |
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| Protein GI | 121998585 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGAAC GAGGGGCAGA GCAACGCATT GCCCTGGTGC TGGAGTACGA CGGCACCGGC
TTCAGCGGCT GGCAGCGACA GGACGACGCC CCGTCGGTGC AGGAGGCCCT CGAGGGGGCT
GTGTCGCGGA TCGCCAATCA CCCGGTGGCG GTGGTCTGTG CCGGCCGCAC CGATGCCGGG
GTTCACGCCG CCGCCCAAGT GGTCCACTTC GATACCACCG CATCGCGGCC GCTGCACGCC
TGGGTGCTGG GCACCAATGC GCAGCTACCC GAGACGGTCA GCGTCCGTTC GGCCCACGCC
GTCGATGCGG ATTTCCACGC GCGCTATCAA GCGCAGCGGC GGGGGTACCG CTATGTCTTC
CTGTGCCGGC GGGCCCGCCC GGCGCTTCTG CGTCACCGCG TGGCCTGGAC CCACCACGAG
CTGGATGAGG GGCGCATGCA TCGGGCCGCC CAGGCCCTGG TTGGCGAGCA CGATTTCTCG
GCCTTCCGGG CCGCCGCCTG CCAGGCGCCC CACGCGGTGC GGGAGGTCTA TCGGCTCGAT
GTGCACCGCC ACGGCGAGCT GCTGTTCATC GACATCGAGG CCAACGCCTT CGTGCACCAT
ATGGTGCGCA ATATCGCCGG CACCCTGATG GCCGTGGGAA CCGGCGAGCA GCCTGAGCAT
TGGCCCGCGG GATTGCTCGC CGCCGGCGAC CGGACCCGCA GCGGGATGAC GGCCCCGGCG
GCCGGGCTCT ACCTGACCCG CGTGGTCTAC CCGTCGCATT ACGGCCTCCC GACCCGGGGG
CAGTGGCCGT TTTTGGCGTA A
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| Protein sequence | MAERGAEQRI ALVLEYDGTG FSGWQRQDDA PSVQEALEGA VSRIANHPVA VVCAGRTDAG
VHAAAQVVHF DTTASRPLHA WVLGTNAQLP ETVSVRSAHA VDADFHARYQ AQRRGYRYVF
LCRRARPALL RHRVAWTHHE LDEGRMHRAA QALVGEHDFS AFRAAACQAP HAVREVYRLD
VHRHGELLFI DIEANAFVHH MVRNIAGTLM AVGTGEQPEH WPAGLLAAGD RTRSGMTAPA
AGLYLTRVVY PSHYGLPTRG QWPFLA
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