| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1803 |
|---|
| Symbol | |
|---|
| ID | 4711014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1975161 |
|---|
| End bp | 1975982 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639856273 |
|---|
| Product | tryptophan synthase, alpha subunit |
|---|
| Protein accession | YP_001003369 |
|---|
| Protein GI | 121998582 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGCA TCGCTGAACG TTTCCGTGCC TGCCGTTCCG CCGGCCGGAC GGCCTTGATT
CCCTACATCA CCGGTGGCGA CCCGTCGCCC GATGACACCG TGCGCCTGAT GCACGCCCTG
GTGGCCGGCG GCGCCGACGT CATCGAGATT GGCGTGCCGT TCTCCGATCC GATGGCTGAC
GGTCCTGTGA TCCAGGCGGC GTGTGCCCGG GCCCTGGCGG CCGGCACGAC GCCGGCGCGG
CTGTTCGAGG TGGTGCGCCG CTTCCGAGAG GAGGATCCGG ACACGCCGGT GGTCTTCATG
GGCTACGCCA ATATCCTCGA GGCTGCCGGT TATCGCGCCT TCGTTCGCGA TGCGGCGGCC
GCCGGCGTCG ACGGCCTGCT CACCGTTGAC CTGCCGCCGG AGGAGGCCGG GGCGTTGGCC
GATGAGGCCC GGGTCCAGGG TGTCGATCTG ATCTACCTGG TGGCGCCCAA TACGAGCGCC
GAACGCGTGG AGCGGGTCTG TTCGGTGGCC GGCGGTTTTG TCTACGCGGT GGCCCTCAAG
GGGGTGACCG GGTCGGCGGA CCTGGACGCC GGGTTGGTCG GGCAGCAGGT CGCCGGCATC
CGTCGGGTGA CCGATCTACC GGTGGCCGTC GGATTCGGGG TGCGTGATCC GCAAAGTGCC
GCGGCACTGG CGCCGTGTGC CGACGGCGTG ATCGTCGGCA GCGCGTTGGT GCGTATGATT
GGTGAGCACG GGGCGGCGGC GGATCTGCCC GAGCGTCTGC GCGATGCCGT CCTGGCCCTG
CGCCGGGCGA TGGACGACAC GACGACGGGG GGTGACTCGT GA
|
|---|
| Protein sequence | MSRIAERFRA CRSAGRTALI PYITGGDPSP DDTVRLMHAL VAGGADVIEI GVPFSDPMAD
GPVIQAACAR ALAAGTTPAR LFEVVRRFRE EDPDTPVVFM GYANILEAAG YRAFVRDAAA
AGVDGLLTVD LPPEEAGALA DEARVQGVDL IYLVAPNTSA ERVERVCSVA GGFVYAVALK
GVTGSADLDA GLVGQQVAGI RRVTDLPVAV GFGVRDPQSA AALAPCADGV IVGSALVRMI
GEHGAAADLP ERLRDAVLAL RRAMDDTTTG GDS
|
|---|
| |