| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1791 |
|---|
| Symbol | |
|---|
| ID | 4710980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1964450 |
|---|
| End bp | 1965529 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639856261 |
|---|
| Product | radical SAM protein |
|---|
| Protein accession | YP_001003357 |
|---|
| Protein GI | 121998570 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATGCCG AGCGCCGGTC GGGTCCGGTC GAGCTGCTAG GGCTCGATCG GCCCCGGTTG
GCGGCCTTCT TCGATACCCT GGGCGAGAAG CGGTTTCGCG CCCGGCAGAT CATGCAGTGG
CTGCATCAAC GCCACGTGTA CGACTTCGAC GAGATGACCG ACCTCAGTAA GGCGTTGCGC
CAGCGGCTGC GTGAGCACGC CCGGGTCGGT CTCCCCGAGG TGGCTGCGGA TCAGCAGGCC
AGCGACGGCA CCCGCAAGTG GGTGGTGCGC CTGGCCGACG GCAACTGTGT CGAGGCCGTC
TACATCCCCG AGCCCAAACG CGGGACGCTG TGCATCTCCT CCCAGGCCGG GTGCCCGATG
GGTTGCACCT TTTGCGCCAC CGGCGAGGGC GGTTTCTCGC GGAACCTCAC CGCTGCCGAG
ATCGTGGGTC AGGTCCATGT GGCGCGCCAG CACCTTCCGG AGGGGGCGAT TACCAACATC
GTCTTCATGG GAATGGGCGA GCCGTTGCTC AACTTCGACC CGGTCATTTC GGCCTCACGC
GTGTTCACCG ACGACTACGG GTTCGTGCTC TCCAAGCGTC GGGTGACCAT CTCGACCTCG
GGCGTCGTCC ACGCCATCGA GCGCATGCAA CGCGTCACGG ATGTCAGCCT GGCGGTATCG
CTGCACGCGC CCAACAACGA ACTGCGCAAC CAGTTGGTCC CGCTCAACCG CAAGAATCCC
CTCGAGCGCC TGCTGCCGGC CTGCCACGCC TATATCGCGG AAAAGCCGCA TCGGCGGATC
ACCTGGGAGT ACGTCATGCT CGATGGGGTG AACGATCAGG ACGAGCACGC CCGCGAGCTG
CTCCAGCGGC TGCGCGGGAT CCCGTCGAAG GTGAACCTGA TTCCGTTCAA CCCCTATCCC
GGGGCGCGCT ACGGCCGCAC GCCGGACCGC CAGGTGCGCC GGTTTGCGGA TCGGCTGCTC
GAGCACGGAC TAACCGCGAC CATCCGCGAG ACCCGCGGGG ATGACATCGA CGGCGCCTGT
GGACAACTCG TCGGCGAGAT TCGCGACGCC CGGGCCAGCA AGGTGGCGAG ACCGGCGTGA
|
|---|
| Protein sequence | MHAERRSGPV ELLGLDRPRL AAFFDTLGEK RFRARQIMQW LHQRHVYDFD EMTDLSKALR
QRLREHARVG LPEVAADQQA SDGTRKWVVR LADGNCVEAV YIPEPKRGTL CISSQAGCPM
GCTFCATGEG GFSRNLTAAE IVGQVHVARQ HLPEGAITNI VFMGMGEPLL NFDPVISASR
VFTDDYGFVL SKRRVTISTS GVVHAIERMQ RVTDVSLAVS LHAPNNELRN QLVPLNRKNP
LERLLPACHA YIAEKPHRRI TWEYVMLDGV NDQDEHAREL LQRLRGIPSK VNLIPFNPYP
GARYGRTPDR QVRRFADRLL EHGLTATIRE TRGDDIDGAC GQLVGEIRDA RASKVARPA
|
|---|
| |