| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1790 |
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| Symbol | |
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| ID | 4710919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1963710 |
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| End bp | 1964435 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639856260 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001003356 |
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| Protein GI | 121998569 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCGG TCCTGATGGT TGCAGGTTGC GCGACCGGGC CCGAGGTGCC TGACGATCGG
CGCGCAGCCG ATAGCCACGC TGGAGCGGGT CTCTACTTGA TCGCCGAAGG GCAGCCCGAT
CAGGCGCGGT CGCGCCTGGA GCGCGCCTTG CAGATCGATG CCGAGCACCC CCAGGCGCTG
ACCGGGATGG GGCTCGTCGC CGAGTCGCAG GGCGACGCGC AGGCGGCTCA TGGGTACCAT
CAGCGAGCAG CGCAGGCCGA TCCCGACTCG GGGGCGATCC TGAATAACTG GGGACGCAGC
CTGTGTCGTG CCGGAGAGGA AGACGACGCG TTGGCGGTCT TCGCCGAGGC TGCCCAGGTC
GATGGCTATG ATGCCGCCGA AGTGCCGCTG ACCAACGCCG CGCGCTGTGC CCTCGACGCG
GGACGCGAAG ACGCCGCCGC CCGACGGGCG GACGCGGCCG TCGAGGCGGC ACCAGAGTTC
GCTCCGGCGC GTGTGGTGCG CGGGGAGCTG CGCTACCGCC AGGGGGCCCT CGAGGCAGCC
GCAGACGACC TGGCGCGGGC TCGTGACAGC GGTGGTGCCG GGGCGCGCGG CCTGTACTGG
TCGGCACGTG TGGCAGCAGC CCGGGACCGA CCTGAGGAGG CCGCTGCCTT CGCGCAGAGG
CTGGCCGAGC GCTTCCCCGG TTCGGAGTGG AGCGAACGTT TACACGCGGA TGAGGTCGGG
CCATGA
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| Protein sequence | MLAVLMVAGC ATGPEVPDDR RAADSHAGAG LYLIAEGQPD QARSRLERAL QIDAEHPQAL
TGMGLVAESQ GDAQAAHGYH QRAAQADPDS GAILNNWGRS LCRAGEEDDA LAVFAEAAQV
DGYDAAEVPL TNAARCALDA GREDAAARRA DAAVEAAPEF APARVVRGEL RYRQGALEAA
ADDLARARDS GGAGARGLYW SARVAAARDR PEEAAAFAQR LAERFPGSEW SERLHADEVG
P
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