Gene Hhal_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1789 
Symbol 
ID4710918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1963123 
End bp1963713 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content74% 
IMG OID639856259 
ProductXRE family transcriptional regulator 
Protein accessionYP_001003355 
Protein GI121998568 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATG AGACGGCGCA CGGGGACGGC GACGGAGCGC GGCCGCCAGG CGGCGACCCG 
GCAGCGGCGG AGGGGGAGGG TGCCCCGCCA TCGCCGGGGC AGCAGCTGCG GCGCGCCCGT 
GAGGCGCAGG GGCGAACCGT ACGAGCCGTG GGGGCGAGCC TCAATCTCCC GGCGGACCGG 
GTCACCGCGC TGGAAGAGGA CGACGATGAA CGCCTGCCGC CGCCAACCTT TGTGCGCGGG 
TACCTGCGCG CCTACGCACG GCTGGTGGGG CTCGACCCCG AGGCGGTGGT GGAGGCCTAC 
AACCGGCGCC GGGGGAGCGA TCCAGTCAGC GAGGAGCGGG CCGTGGGCAA CGTGGCGGCC 
GTCGAGCCCC GGTCGTCCGG GCGGGGCCCG CGACGGCGTC GCTGGCTACC GGCCGCGCTC 
CTGCTACTTC TGATCGCCGT GGCTGTGGTC CTCACCGCGA TCCTGCTCGA TGACAGGGAG 
CCGGAGCCGG CTGGGCCGGG CGAGGAAACG GGCCAGCCCC CGGAGTCCGC AAGCGAGCAG 
TCGGGCACGC CGAGCACCGG TGTGCGTCGG ACGTCGATGG ATTCGGAGTA G
 
Protein sequence
MSDETAHGDG DGARPPGGDP AAAEGEGAPP SPGQQLRRAR EAQGRTVRAV GASLNLPADR 
VTALEEDDDE RLPPPTFVRG YLRAYARLVG LDPEAVVEAY NRRRGSDPVS EERAVGNVAA 
VEPRSSGRGP RRRRWLPAAL LLLLIAVAVV LTAILLDDRE PEPAGPGEET GQPPESASEQ 
SGTPSTGVRR TSMDSE