Gene Hhal_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1787 
Symbol 
ID4710916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1961193 
End bp1961819 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID639856257 
Producthypothetical protein 
Protein accessionYP_001003353 
Protein GI121998566 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGCA GCGACGACGA ACAGCTTCAG CAGCTCAAGG ATTGGTGGCA GCGCAATGGG 
GGCTCGATCC TCCTCGGGTT GACCGGGGCG CTGCTGATCC TGGCCGGCTG GTGGGGGTAT 
GGCACGTGGC AGGAGCGCGG GGCTCAGCAG GCCGCAGCGG CCTACGCCGA GTTCCTTCAG 
GCGACTCAAT CCGGTGAGCC GGAGGCGGCG GAGCAGGCGG GTCAGCGGGT GCTGGACGAC 
CACGCCCGCA GCGGCTATGC CGGGATGACC GCCCTGCGCA TGGCCCGTAT CCAGGCCGAG 
GCGGGCGAGT ATCGGCGGGC GGCCGAGACC CTCGGGTGGC TGATCGACAA CGCCGACCAC 
AGCGCCATGG TCGAACTGGC CCGCCTGCGC CAGGCCCGCG TGCTCGGCGA GGAGGACCCG 
GAGGAGGCGC TGGCGGTCCT CGAGGGCTCC GTCTCCGCCG GTTTTACCGC CTCGTTCGAC 
GAGCTTCGCG GCGATCTGCT CCGCGAGTTG GGACGCTACG ACGAGGCCGC CGAGGCGTAC 
CAGCAGGCGC TGGATCAGGA GGGGCTCGGG GCGCAGTCCC GCGAACTGGT CCGTCTGAAG 
CTGCAGGCCG TGGAGAGTGA GGCGTGA
 
Protein sequence
MERSDDEQLQ QLKDWWQRNG GSILLGLTGA LLILAGWWGY GTWQERGAQQ AAAAYAEFLQ 
ATQSGEPEAA EQAGQRVLDD HARSGYAGMT ALRMARIQAE AGEYRRAAET LGWLIDNADH 
SAMVELARLR QARVLGEEDP EEALAVLEGS VSAGFTASFD ELRGDLLREL GRYDEAAEAY 
QQALDQEGLG AQSRELVRLK LQAVESEA