Gene Hhal_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1774 
SymbolgreA 
ID4711011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1946956 
End bp1947432 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID639856244 
Producttranscription elongation factor GreA 
Protein accessionYP_001003340 
Protein GI121998553 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.110279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA TACCGTTGAC GATTCGTGGT GCAGAGAAGC TGCGTGAAGA GCTTCACCGG 
CTCAAGCACG AAGACCGGCC GCGGGTTATT CAGGCCATTG CCGAGGCGCG TGAGCACGGC
GATCTGAAGG AGAACGCCGA GTACCACGCC GCGCGCGAGC AACAGAGCTT TATCGAGGGC
CGAATCCAGG AGATCGAGGG CAAGCTGTCC AATGCCCAGA TCATCGATCC GGCTGCGGTC
CAGGCGGCGC CGAAGATTGT CTTCGGCGCC ACTGTGGCGC TTGAAGACAC GGACACTGAA
GAGACGGTCA CCTATCAGAT CGTTGGCGAG GACGAGGCGG ACATCAAGCA ACACCTGATC
TCGGTCAATT CGCCCATCGC CCGCGCCCTG ATCGGCAAGG AGGAGGGTGA CGAGGCTGTG
GTTCAGGCCC CGGGCGGAGA GCGGACCTAC GAGATCGTCG AGGTTCGGTA TGAATAG
 
Protein sequence
MSKIPLTIRG AEKLREELHR LKHEDRPRVI QAIAEAREHG DLKENAEYHA AREQQSFIEG 
RIQEIEGKLS NAQIIDPAAV QAAPKIVFGA TVALEDTDTE ETVTYQIVGE DEADIKQHLI
SVNSPIARAL IGKEEGDEAV VQAPGGERTY EIVEVRYE