Gene Hhal_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1772 
Symbol 
ID4710935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1946088 
End bp1946444 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content64% 
IMG OID639856242 
Producthypothetical protein 
Protein accessionYP_001003338 
Protein GI121998551 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.590818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCGGAC CACGCCACGG CGTGGTAGCC TCCCCGATCT ATAGTCACCA GGCACCCGAC 
ACCTCCATGC AGTTAGACCC GGATCAACTC AAGCAGCTAC GCCGGCTCGG CCACGCCCTC
AAGCCTGTCG TCCTGACCGG GGCCGCCGGC CTCAGTGAGG GAGTCTTGGA GGAGATCGAG
CGGGCCTTGG ACGACCACGA GCTGATCAAG GTCAAGCTCG CCGGCGCCAG CAAGGAAGAA
CGCCAGGCAA TGACCACGGA GATCGCAGAG CAGACCGGCG CCGTCGTGGT GCAGACCATC
GGGCGCATCG TGCTCCTCTA CCAGGAAAAC CCCGAGAAGA GCCAAGTCCT GATCTAG
 
Protein sequence
MPGPRHGVVA SPIYSHQAPD TSMQLDPDQL KQLRRLGHAL KPVVLTGAAG LSEGVLEEIE 
RALDDHELIK VKLAGASKEE RQAMTTEIAE QTGAVVVQTI GRIVLLYQEN PEKSQVLI