Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1772 |
Symbol | |
ID | 4710935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1946088 |
End bp | 1946444 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639856242 |
Product | hypothetical protein |
Protein accession | YP_001003338 |
Protein GI | 121998551 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.590818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCGGAC CACGCCACGG CGTGGTAGCC TCCCCGATCT ATAGTCACCA GGCACCCGAC ACCTCCATGC AGTTAGACCC GGATCAACTC AAGCAGCTAC GCCGGCTCGG CCACGCCCTC AAGCCTGTCG TCCTGACCGG GGCCGCCGGC CTCAGTGAGG GAGTCTTGGA GGAGATCGAG CGGGCCTTGG ACGACCACGA GCTGATCAAG GTCAAGCTCG CCGGCGCCAG CAAGGAAGAA CGCCAGGCAA TGACCACGGA GATCGCAGAG CAGACCGGCG CCGTCGTGGT GCAGACCATC GGGCGCATCG TGCTCCTCTA CCAGGAAAAC CCCGAGAAGA GCCAAGTCCT GATCTAG
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Protein sequence | MPGPRHGVVA SPIYSHQAPD TSMQLDPDQL KQLRRLGHAL KPVVLTGAAG LSEGVLEEIE RALDDHELIK VKLAGASKEE RQAMTTEIAE QTGAVVVQTI GRIVLLYQEN PEKSQVLI
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