| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1770 |
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| Symbol | |
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| ID | 4710967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1943243 |
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| End bp | 1945198 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639856240 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001003336 |
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| Protein GI | 121998549 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.292571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACA TGGCCAAGAA TTTGATCCTT TGGGTCATCA TCGCCGTCGT GCTGATGTCC
GTATTCAGCA ACTTCCAGGA ACAATCGGCG GATGTGACCG AGAAGGTTCC CTACTCGGAG
TTCCTCAACG AGGTCGAGCG GGGGAACATC CGCGAGGTGC TGATCCGGGG TGAGGAGATC
ACCATCCAGC ACGCCGACGG CAACGAGTAC CGGACCTTCA ACCCGGAGGT CGACAACCGC
GCGCTGATCG GCGAACTGCT TGAGCACGGC GTCACCATCG ATGCCGAGCA GGCTGAAAGC
GACAGCATGC TCATGCAGAT CCTCATCTCG TGGACGCCCT TCCTGCTGCT GATCGCCGTG
TGGATCTACT TCATGCGCCA GATGCAGGGA GGCGGCGGTG GCCGCGGGGC GATGTCCTTT
GGCAAGAGCA AGGCCAAGAT GATGACCGAG GAGCAGAGCA AGCACAGCTT CTCGGACGTG
GCCGGTTGCG ATGAGGCCAA GGAGGACGTC AAGGAACTGG TGGACTTCCT GCGTGACCCG
AGCAAATTCC AAAAGCTTGG CGGGACGATC CCGCGGGGCG TGCTCATGGT GGGTCCTCCG
GGAACCGGCA AGACCCTGCT CGCCAAGGCG ATCGCCGGGG AGGCCCGGGT GCCGTTCTTC
TCGATCTCCG GTTCGGACTT CGTCGAGATG TTCGTCGGTG TCGGCGCCTC GCGGGTTCGC
GACATGTTCC AGCAGGCGAA GAAGCAGGCC CCGTGCATCA TCTTCATCGA CGAGCTCGAC
GCCGTGGGGC GGCAGCGTGG GGCCGGTCTC GGCGGTGGGC ACGATGAGCG CGAGCAGACG
CTGAACCAGA TGCTCGTCGA GATGGATGGA TTCGAGGGCA GTGAAGGGAT CATCGTCATC
GCTGCCACCA ACCGTCCCGA CGTCCTCGAC CCGGCGCTGC TGCGTCCGGG GCGCTTCGAC
CGTCAGGTGG TGGTGCCGCT GCCCGATGTC CGAGGGCGTG AGCAGATCCT CAACGTGCAC
ATGCGCAAGG TACCGACGGC GGACGATGTC CGGCCCGAGA TCATCGCCCG CGGGACGCCG
GGCTTCTCCG GCGCCGACCT GCAGAACCTG GTCAATGAGG CAGCGCTGTT CGCGGCCCGA
GCCAACAAGG AGGCCGTCGA TCAGACGGAC TTCGAGCAGG CCAAGGACAA GATCATGATG
GGCTCCGAGC GCAAGTCCAT GGTGATGAAA GAGGACGAGA AGAAGCTCAC GGCCTACCAC
GAGGCCGGGC ACGCCATCGT CGGCTTGCTC ACCCCGGAGC ACGATCCGGT TCACAAGGTG
ACGATCATCC CGCGGGGGCG CGCGCTGGGC GTGACCATGT TCCTTCCTGA GGAGGATCGC
TACAGCTACA CCAAGCAGCG CCTGGACAGC ATGATCGCCA GCCTCTTCGG TGGGCGGATT
GCCGAGGAGC TGATCTTCGG CAACGACCGG GTCACTACCG GTGCCCAGAA CGACATCCAG
CGGGCCACCG AGATTGCCCG CAACATGGTC ACCAAGTGGG GGCTTTCGGC GCGGCTCGGT
CCGCTCGCCT ACGGCGAGGA GGAGGGCGAG GTGTTCCTCG GCCGCTCCAT GGCGCAGCAG
AAGGACGTCT CCGACGAGAC GCAGCACGCC ATCGACGAAG AAGTGCGCGC AGTGATCGAC
AACAACTACA CTGCGGCTGA GAAGATCCTC CAGGAGAACC TGGAGAAGCT GCACCTGATG
GCTGATGCGC TGATGAAGTA CGAGACCATC GACCGCGATC AGATCGACGA CATCATGCGG
GGCGACGAGC CGCGACCGCC CAAAGGGTGG CAGGATCGGG ATCACGGTGG TGGCTCGGGC
GACGAGGGTG AGACTGCCGG GGCCGATGAC CAGCCCGAGG CCGAAGGTAA AGACGGCCGC
GAGGGGCCCA TCGGCGGACC TGTAGGCGAG CACTGA
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| Protein sequence | MSDMAKNLIL WVIIAVVLMS VFSNFQEQSA DVTEKVPYSE FLNEVERGNI REVLIRGEEI
TIQHADGNEY RTFNPEVDNR ALIGELLEHG VTIDAEQAES DSMLMQILIS WTPFLLLIAV
WIYFMRQMQG GGGGRGAMSF GKSKAKMMTE EQSKHSFSDV AGCDEAKEDV KELVDFLRDP
SKFQKLGGTI PRGVLMVGPP GTGKTLLAKA IAGEARVPFF SISGSDFVEM FVGVGASRVR
DMFQQAKKQA PCIIFIDELD AVGRQRGAGL GGGHDEREQT LNQMLVEMDG FEGSEGIIVI
AATNRPDVLD PALLRPGRFD RQVVVPLPDV RGREQILNVH MRKVPTADDV RPEIIARGTP
GFSGADLQNL VNEAALFAAR ANKEAVDQTD FEQAKDKIMM GSERKSMVMK EDEKKLTAYH
EAGHAIVGLL TPEHDPVHKV TIIPRGRALG VTMFLPEEDR YSYTKQRLDS MIASLFGGRI
AEELIFGNDR VTTGAQNDIQ RATEIARNMV TKWGLSARLG PLAYGEEEGE VFLGRSMAQQ
KDVSDETQHA IDEEVRAVID NNYTAAEKIL QENLEKLHLM ADALMKYETI DRDQIDDIMR
GDEPRPPKGW QDRDHGGGSG DEGETAGADD QPEAEGKDGR EGPIGGPVGE H
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