| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1763 |
|---|
| Symbol | |
|---|
| ID | 4711082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1937742 |
|---|
| End bp | 1938482 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639856232 |
|---|
| Product | NADH (or F420H2) dehydrogenase, subunit C |
|---|
| Protein accession | YP_001003329 |
|---|
| Protein GI | 121998542 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.431152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC CCGAGAGCCT CTTAGAGCAG CTCCGCGGCC ATTTCGGTGG CCGTTTGACC
GATTGCTGGC TCGAGCGCGG CGAGGTGACG GCAGACGTCC GGCCTGCCGA CCTGCTGGCG
GTCATGACCG AACTGCGAGA CGGTGCCGAG TGGCGCTTCG AGCAGCTTTC CGATGTTGCC
GGGGTTGATT ACGCGGCTTA CGGCCAGGAC GAGTGGATCA CCGAGTCGGC GACCGGCACG
GGCTTCAGCC GCGGCGTTAC GGAGCCGGGC TTCGGGCGCT TGGGCCTGAC CGGCATCTAC
GGTGTGCAGT CGATCGAGGA GCAGACCGGT CGGCGCTTCG CGGCGGTCTA TCAGCTGCTG
TCGCTGACCC ACAACCACCG TCTACGCGTG CGCTGCTTCG CCGAAGACGA CGACCTCCCG
GTCCTGCCGT CGGTAACCGG CATCTGGCCC TGCGCCAACT GGGCCGAGCG GGAGGCCTTC
GACCTCTACG GCATTGTTTT CGAAGGCCAT CCGGACCTGC GCCGCATCCT GACCGATTAC
GGCTTCGTGG GTCATCCGTT CCGTAAGGAC TTCCCGCTGA TCGGCAACGT CGAGCCGCGC
TACGACCCCG AAAAAGGCCG TGTGGTCTAC GGCCCGGTGG AGATCGAGCC GCGGGTGCTG
GTGCCGCGGG TCATCCGTGA AGACAACCGC TATGCCGCAC CGCAGAAGGC GGAAGGCACG
GAGGGACAAG CCGATGGCTG A
|
|---|
| Protein sequence | MAEPESLLEQ LRGHFGGRLT DCWLERGEVT ADVRPADLLA VMTELRDGAE WRFEQLSDVA
GVDYAAYGQD EWITESATGT GFSRGVTEPG FGRLGLTGIY GVQSIEEQTG RRFAAVYQLL
SLTHNHRLRV RCFAEDDDLP VLPSVTGIWP CANWAEREAF DLYGIVFEGH PDLRRILTDY
GFVGHPFRKD FPLIGNVEPR YDPEKGRVVY GPVEIEPRVL VPRVIREDNR YAAPQKAEGT
EGQADG
|
|---|
| |