Gene Hhal_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1756 
Symbol 
ID4710533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1930121 
End bp1930732 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID639856225 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_001003322 
Protein GI121998535 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGG TGATCTTCTA CATCTTCGCC GGGGTGCTGC TGTTCGCAGC GACCATGGTG 
ATCTCGGTGC GCAACCCGGT CCACGCGGCG TTGTTCCTGG TGCTCGCGTT CTTCAACGCC
GCGGTGATCT GGGTACTTGC CGGTGCCGAA TTCCTGGGGA TCGCGCTGGT GCTCGTCTAC
GTCGGCGCGG TGATGGTGCT CTTCCTCTTC GTGCTGATGA TGCTCGATAT CAACATCGCC
CCGATGCGCG AGGGGTTCAC GCGGTACCTC CCGGTGGGGG CCCTGGTCGC AGTGCTGATG
GCCGCGCAGC TGGTGGCGGT CATCGTCTCG GAGCGGGCGG ATCTGATCAG CGGCACGATC
CCCGAGCCGG CGGCAGACGT GAACAACATC CAGGCCATCG GTGGGGTGCT GTACACGGTC
TACGTCTACC CGTTCGAGAT CGCGGCGGTG ATCCTGCTGC TGGCCATCGT CGCCGCGATC
ACCCTGACGC TGCGCCGGCG CGAGGGGACG CATAAGCAGG ACGTGTCCCG GCAGCTGTCG
GTGAAGAAGG ACGACCGCCT GCGTCTGGTG CGCATGAAGT CCTCGCGGCG GCAGGACCAT
AGGCAGAACT AA
 
Protein sequence
MEQVIFYIFA GVLLFAATMV ISVRNPVHAA LFLVLAFFNA AVIWVLAGAE FLGIALVLVY 
VGAVMVLFLF VLMMLDINIA PMREGFTRYL PVGALVAVLM AAQLVAVIVS ERADLISGTI
PEPAADVNNI QAIGGVLYTV YVYPFEIAAV ILLLAIVAAI TLTLRRREGT HKQDVSRQLS
VKKDDRLRLV RMKSSRRQDH RQN