Gene Hhal_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1752 
Symbol 
ID4709423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1924762 
End bp1926216 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content67% 
IMG OID639856221 
Productproton-translocating NADH-quinone oxidoreductase, chain N 
Protein accessionYP_001003318 
Protein GI121998531 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCG AGACGCCCGA TTTCTCCCTG GCGCTGCCGG AAATCTGGTT GCTGGCGGCC 
ACCTGCGGTG TGCTGGTGGT GGACCTCTTC TCCAGCGATC CCCGGCGTAG CGCGACCTTT
TACCTGACCC AGGGAGCGCT GCTGGTCACC GCAGTGCTGG CCCTGAGTAC CCAGTGGGGC
GTGAACGAGG TGACCTTCTC GGGCCACTAC ATGGCCGATT CGCTGGGTGC CGTGGTGAAG
GCCTCCGTAG CGCTCTTGTC GGTGCTCGCC CTGGCCTATA CGCGGCCCTA CCTGGGGGAC
CGCGGCCTGC TCCAGGGGGA GTTCTACCTG CTGGCGCTGT TCGCCAACCT GGGCATGCTG
GTGATCGCCT CCGGGGGGAG TCTGCTGAGC CTTTACCTCG GCCTGGAGCT GCTGTCGCTG
GCGCTCTACG CGCTGGTGGC CTACCACCGT GATTCGCGCC AGGCGGCCGA GGCGGCGATG
AAATATTTCG TCCTCGGTTC GCTGGCCTCG GGGATCCTGC TCTACGGCAT GTCGATGGTC
TACGGCGCCA CGGCGAGCCT GGAGCTGTCG GTGATCGCCG AGGTGGCCGG CCGTCACTCC
GATCCGCTGA TGTTGCTCTT CGGCGTGGTG TTCATGCTGG TGGGCGTGGC CTTCAAGCTC
GGGGCCGCGC CGTTCCACGC CTGGGTGCCG GACGTCTATC AGGGCGCCCC GACGCCGGTG
ACGCTGTTCC TGAGCACCGC GCCCAAGGTT GCGGCGGTGG CGCTGTTCAT GCGCCTGCTC
GTTGACGGGC TGGGGCCGAT GCACGAGCAG CTCGAGCCGA TGCTGATGAT CCTGGCCGTC
GCCTCGCTGT TGGTTGGCAA CCTGATCGCC ATCGTGCAGA CCAACTTCAA GCGCATGCTG
GCCTATTCGG CCATCGCCCA CGCCGGCTTC ATCATGGTTG GGTTCACGGC CGGGACGGAT
GCCGGTCATG CGGCGGCCCT GTTCTACACA ATCGCCTACA GCATCATGGC GGCCGGCGCC
TTCGGGATGA TTACGGTGTT GGCGCGCTCC GGTTTCGAGG CCGAGGAGAT TGCCGATCTG
CGCGGGCTCA ATGAGCGCCA CCCGGTCTAC GCCGGCGTGC TGTTGCTGGT GCTGGTGTCG
ATGACGGGCA TCCCCGGTAC CGTGGGCTTC TACGCGAAAT ACCTGGTCCT CCAGGCCGCC
GTCGAGGCGG GCCATATCCC GCTGGCGATC TTTGCCGTGG TGGCGGCCGT GGTGGGCGCC
TTCTACTACC TGCGGGTTCT CAAGGTCGTC TACTTCGACC GCCCGGAGGC CGAGGTGGAT
GCGGATACGC TGCCGGCTCC CGGCGCCTCC TCGGCGATCC GCAGCCTCGT GGTGGTCAAC
GGCGTCGCGG TCCTGGTGCT GGGGATCTTC CCGGAGCGCC TGATCGCGCT GTGCCAGGCG
GCTTTGGGCC TTTAG
 
Protein sequence
MSFETPDFSL ALPEIWLLAA TCGVLVVDLF SSDPRRSATF YLTQGALLVT AVLALSTQWG 
VNEVTFSGHY MADSLGAVVK ASVALLSVLA LAYTRPYLGD RGLLQGEFYL LALFANLGML
VIASGGSLLS LYLGLELLSL ALYALVAYHR DSRQAAEAAM KYFVLGSLAS GILLYGMSMV
YGATASLELS VIAEVAGRHS DPLMLLFGVV FMLVGVAFKL GAAPFHAWVP DVYQGAPTPV
TLFLSTAPKV AAVALFMRLL VDGLGPMHEQ LEPMLMILAV ASLLVGNLIA IVQTNFKRML
AYSAIAHAGF IMVGFTAGTD AGHAAALFYT IAYSIMAAGA FGMITVLARS GFEAEEIADL
RGLNERHPVY AGVLLLVLVS MTGIPGTVGF YAKYLVLQAA VEAGHIPLAI FAVVAAVVGA
FYYLRVLKVV YFDRPEAEVD ADTLPAPGAS SAIRSLVVVN GVAVLVLGIF PERLIALCQA
ALGL