| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1750 |
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| Symbol | nusA |
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| ID | 4710487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1922385 |
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| End bp | 1923890 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639856218 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001003316 |
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| Protein GI | 121998529 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.844805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG AAATCCTGTT GGTCGTGGAG GCCACCTCCA ATGAGAAGGG TGTGGACCGG
GAGGTGATCT TCGAGGCCAT TGAGGCGGCC CTGGCCTCGG CCACGCGCAA GCGCCATCTG
GAGGACATCG ACGCCCGCGT TGCGGTCGAT CGGCAGAGTG GCGATTACGC CACCTATCGG
CGCTGGGAGG TGGTCCCCGA CGAAGAGTCG GTGGAGGAGC CGCAGCGCCA GATCAGCCTG
GAGCGTGCCC GGGAGCGTGA TGAGAACGCC GAAGTGGGCG GGTATGTCGA GGAGCCCATC
GAATCGGTCG ACTTCGGCCG CATCGCCGCG CAGACTGCCA AGCAGGTCAT CGTGCAGAAG
GTGCGCGAGG CCGAGCGGGC GCAGATCGTT GACGCTTACC AGCACCGTAT CGGCGAGTTG
GTCAACGGCT CGGTCAAGCG TATGGAGCGC GGTAGCGCCA TCATCGATCT GGGCGAGAAC
ACCGAGGCTC TAGTCTCCCG CGAAGATCTG ATCCCGCGGG AGGCTGTGCG ACCCAACGAC
CGTATTCGCG GCTACCTGCG TGACGTCCGC TCAGAGCCGC GGGGGCCGCA ACTGTTCGTC
AGCCGCACGG CCAATGAGTT TCTGGTCGAG CTCTTCAAGA TCGAGGTGCC CGAAGTCGGC
CAGGGGTTGA TCGAGATCCT GGGCGCCGCC CGCGATCCGG GGATGCGCGC CAAGATCTCG
GTGCGGGCTC TGGATCCGCG CATCGATCCG GTCGGGGCCT GCGTGGGTAT GCGCGGCTCG
CGCGTGCAGG CAGTCTCCAA CGAGCTCAGC GGCGAGCGGA TCGATATTAT CCCCTGGGAT
GAGAACCCGG CTCAGTTTGT CATCAACGCG TTGGCGCCGG CCGAGGTCGA GTCCATCGTG
GTCGATGAGG ACCGCGGTGC CATGGATGTC GCCGTCGCCG AGGAGCAACT CTCCCAGGCG
ATCGGTCGTG GTGGGCAGAA CGTGCGGCTG GCCAGCGAGC TCACCGGCTG GGAACTCAAC
GTGATGACGG CCGAGGAGGC CGAGGCGAAG AGCGAGCGCG AAGCCGGTGA GCTGGTGCAG
TTGTTCGTCG AGCACCTCGA CGTCGATGAA GATGTTGCCG GCGTGCTGGT CCAGGAAGGC
TTTTCCAGCA TCGAGGAGGT GGCCTACGTG CCCACCGCCG AGCTGCTGGA GATCGAGGAG
TTCGACGAGG ACATCGTCGA GGCCCTGCGC AGTCGCGCCC GGGATGTGCT CCTGGCCCAG
GCGATTGCCG AGGAGGCCAA CGAGAACCAG CCCAGCGAGG AGCTGCTGGC CCTTGAGGGG
ATGGATGAGC AGACGGCGAA AGCCCTGGCC GAGCGCGGTG TCGCCACGGT CGAGGACCTG
GCCGATCAGT CCGTGGACGA CCTGATGGAG GTCGAAGGCA TGGACGAGGA TCGGGCCGGA
CAGCTGATCA TGAAGGCCCG CGAGCCGTGG TTCGCAGCCA GTGAGGGCGG CGAGCGCGCC
GACTGA
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| Protein sequence | MSKEILLVVE ATSNEKGVDR EVIFEAIEAA LASATRKRHL EDIDARVAVD RQSGDYATYR
RWEVVPDEES VEEPQRQISL ERARERDENA EVGGYVEEPI ESVDFGRIAA QTAKQVIVQK
VREAERAQIV DAYQHRIGEL VNGSVKRMER GSAIIDLGEN TEALVSREDL IPREAVRPND
RIRGYLRDVR SEPRGPQLFV SRTANEFLVE LFKIEVPEVG QGLIEILGAA RDPGMRAKIS
VRALDPRIDP VGACVGMRGS RVQAVSNELS GERIDIIPWD ENPAQFVINA LAPAEVESIV
VDEDRGAMDV AVAEEQLSQA IGRGGQNVRL ASELTGWELN VMTAEEAEAK SEREAGELVQ
LFVEHLDVDE DVAGVLVQEG FSSIEEVAYV PTAELLEIEE FDEDIVEALR SRARDVLLAQ
AIAEEANENQ PSEELLALEG MDEQTAKALA ERGVATVEDL ADQSVDDLME VEGMDEDRAG
QLIMKAREPW FAASEGGERA D
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