Gene Hhal_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1748 
Symbol 
ID4710481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1919270 
End bp1919650 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content70% 
IMG OID639856216 
Productribosome-binding factor A 
Protein accessionYP_001003314 
Protein GI121998527 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0187668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGG ACTATCCGCG CAGCCGGCGC ATCGCCGAGC AGCTCCGTCG TGAGCTGGCC 
GAGGTCATCC GAGACGATGT CGACGACCCG CGCGTCGGGT CGGTGACCAT CTCGGAGGTG 
CAGGTCAGTC GCGACCTGGC GCACGCCACC GTGTACGTCA CCGTACTCGG CGCCGAGGCG 
GCCGAGGCGC AGGCCGGGAT CGATATCCTG AACAAGGCCC ACGGCTTCCT GCGCAGCCAG 
GTGGCGCGGC GCATCCGCGC CAAGCGCACG CCCAGTCTGC GCTTCCTGCA CGACACCGCC 
TTCGATCGCG GTGCGCGGCT GAGTGCCCTG ATCGACGAGG TGGCGCCGCC GCCGGCAGAC 
GACGAACCGA GCAAGGAGTA G
 
Protein sequence
MAKDYPRSRR IAEQLRRELA EVIRDDVDDP RVGSVTISEV QVSRDLAHAT VYVTVLGAEA 
AEAQAGIDIL NKAHGFLRSQ VARRIRAKRT PSLRFLHDTA FDRGARLSAL IDEVAPPPAD 
DEPSKE