| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1747 |
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| Symbol | truB |
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| ID | 4710480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1918348 |
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| End bp | 1919262 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639856215 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001003313 |
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| Protein GI | 121998526 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.108245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAGA GGCGGGGTGG GCGCAACGTC ACCGGCGTGC TGTTGTTCGA CAAGCCGGCT
GGCGTGACCT CCAATAAGGC CCTGCAACAG GTTAAGCGGC TCTTCGGGGC GCGCAAGGCT
GGGCACACGG GCAGTCTCGA TCCGCTGGCT ACCGGCCTGC TGCCGATCTG CTTCGGCGAT
GCAACCAAGG TATCCGGGTT CCTGCTCGAT GCGGACAAAC GGTACGTGGT GACCTGCAAG
CTCGGGGTGG CCACAGACAC CGGCGACGCG GAGGGCACGG AACGCGATCG TGCCGAGGTC
CCCGCGCTGG ACGAGGAGGC GGTCGAACGA GGTCTGACCG GGTTTCGCGG CCCCATCGAC
CAGCTGCCGC CCATGTACTC GGCCATCAAG CACCAGGGCC AGCGACTCTA CGACCTGGCG
CGCCAGGGGG TGGAGGTCGA GCGCGAACCC CGCCGGGTTG AGATCTACGA CCTGCAGCTG
GTGGCGGTTC GTGGGGATGA GCTGGAGCTG TCGGTGCACT GCTCCAAAGG CACCTACATC
CGTACACTGG CCGAGGACAT CGCCCAGGCG CTGGGGACCG TGGGACACGT GTGCGCGCTG
CGCAGGCTCG GGCTGGGGCC GTACCAGGAT CCGGCGATGT GGACCGAAGA GATGCTCGCC
GCGCGGGCGG AGCAGGGGCG CGAGGCGCTG GATGCCACAC TGCTGCCGAT GGACTCGGCC
CTCCAGCAGT ACACCGGCGT CGAGCTTGCC GACGATCTCG CCTACTTTGT CGTCCAGGGG
CAGCCGGTCT TTGTGCCCAA GGCGCCCAGC GAGGGTTGGC TGCGGCTCTA CGATCGCGGC
GGCAACTTCC TGGGCATGGG GCAGGCCCTG GATGACGGGC GCATCGGGCC CAAGCGCCTG
GTGGCGCGCC GCTGA
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| Protein sequence | MAKRRGGRNV TGVLLFDKPA GVTSNKALQQ VKRLFGARKA GHTGSLDPLA TGLLPICFGD
ATKVSGFLLD ADKRYVVTCK LGVATDTGDA EGTERDRAEV PALDEEAVER GLTGFRGPID
QLPPMYSAIK HQGQRLYDLA RQGVEVEREP RRVEIYDLQL VAVRGDELEL SVHCSKGTYI
RTLAEDIAQA LGTVGHVCAL RRLGLGPYQD PAMWTEEMLA ARAEQGREAL DATLLPMDSA
LQQYTGVELA DDLAYFVVQG QPVFVPKAPS EGWLRLYDRG GNFLGMGQAL DDGRIGPKRL
VARR
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