| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1745 |
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| Symbol | |
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| ID | 4710476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1915824 |
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| End bp | 1917932 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639856213 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001003311 |
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| Protein GI | 121998524 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.135347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA GCCAGCTATC CCTGACCCCG GTCAAGCGGA GTTTTCAGTT CGGTCAGCAC
CAGGTGACCC TGGAGACCGG GGGCGTGGCC CGTCAGGCCG ATGGCGCCGT CCTGGTCGAT
ATGGCGGACA CGGTGGTTCT GGTCACCGTG GTCGGCAGGA AGGACCCGGC GGCGGCACGC
GATTTCCTGC CGCTGACGGT CAATTATCAG GAGCGCACCT ACGCTGCGGG GCGTATCCCC
GGTGGCTTCT TCAAGCGGGA GGGCCGGCCC TCCGAGAAGG AGACCCTGAC CTGCCGCCTG
ATCGACCGGC CGATCCGGCC CCTGTTCCCC GAGGGGTTCC GCCAGGAGGT CCAGGTGATC
GCCACGGTGC TCTCGCTCAA CGATGAGGTG GATGCCGACA TTCCGGCGAT GATCGGGACC
TCGGCGGCGC TGGCGTTGTC CGGCATTCCG TTCGAGGGGC CCATCGGTGC CTGCCGGGTT
GGTCACCTCG ACGGCGAGTT CGTACTCAAC CCGACCTTCA GTCAGACGGC GGAGTCGGAT
CTGGATCTGG TCGTGGCCGG CACCCAGGAT GCGGTCCTGA TGGTCGAGTC CGAGGCCAAT
CTGCTGCCGG AGAGCACGAT GCTCGACGCC GTGCTCTACG GGCACGAGCA GATGCAGGTG
GCCATCGATA CCATCAACGA TCTGGCCGCT GAGGCGGGCA AGCCGCGTTG GGACTGGCAG
CCGCCGGCGA AGAACGAGTC GCTGGACTCG GCGGTGGCAG AGCTGGTGCG TTCGGACCTC
GAGGCCGCTT ACCAGATCGC CGACAAGCAG GAGCGCAGTG AGCGGGTTGG CGCCCTGCGC
GACAAGGCGG TGGAGGCGCT GGCCGACGAG GAGCGTGAAG GCTGGGGCGC CGGCGATGTC
GGAGAGGCGT TCAAGACGCT CGAGAAGAAG ATCGTCCGGG GCCGGATTCT GGCCGGTCAT
CCCCGCATCG ATGGCCGCGA CAACCAGACG GTGCGCCCGC TCAACGTGCA GGCCGGTGTC
CTGCCGCGGA CCCACGGCTC GGCGATCTTC ACCCGCGGCG AGACCCAGGC GATCGTGGTC
AGCACGCTCG GTACAGGCCG GGATGCTCAG GTCATCGATG CGCTGGAGGG CGAGCGGCGC
GAGCCGTTTA TGCTGCACTA CAACTTCCCG CCGTACTGCG TGGGCGAGAC TGGCTTCATC
GGCACGCCGA AGCGGCGCGA AATCGGCCAC GGCAAGCTGG CCAAGCGCGG TGTTGAAGCG
GTGATGCCCT CCGACGAGGA GTTCCCCTAC GTGATTCGCG TGGTCTCGGA GGTCACGGAG
TCCAACGGGT CGTCTTCGAT GGCCACCGTC TGTGGCACCA GTCTGTCGCT GATGGATGCC
GGCGTGCCGC TGAAGGCTCA GGTGGCTGGT ATCGCCATGG GCCTGATCAA GGAAGGCGAC
GAGTTCGCCG TGCTCACCGA CATCCTTGGC GACGAGGACC ACCTCGGTGA CATGGACTTC
AAGGTTGCCG GTAGCAAGGA TGGTGTCACT GCGCTGCAGA TGGACATCAA GATCGACGGG
ATCACCCGGG AGATCATGGA ACAGGCCCTG GATCAGGCGC GCTCCGGCCG GCTGCATATC
CTCGAGCAGA TGAATCAGGT GATCGACAAG CCGCGCGAGC AGATGTCCGA GTACGCCCCG
CGGCTGCTGA CCATGAGGAT TGACCCGGAG CGTATCCGGG ACGTGATCGG CAAGGGCGGT
GCGACCATCC GTGGGCTGAC CGAGGAGACC GGTACCAACA TCGACATCAG CGACGAGGGC
GTGGTGACCA TCGCCTCGGC GGACAAGGCG GCCGCCGAAG AGGCGAAGAA GCGCATCGAG
CTGCTGACCG CCGATGTCGA GGTGGGCAAG GTCTACGATG GCAAGGTTGC GAAGCTCATG
GACTTCGGCG CCTTCGTCAA CATCCTGCCC GGTCGGGATG GCTTGGTGCA TATCTCGCAG
ATCTCCAACA ACCGGGTCGA GAACGTCGCC GACGAGCTTT CGGAGGGCGA CTCGGTCCGG
GTCAAGGTGC TCGAGGTCGA TCGTCAGGGC CGGATCCGGC TGTCGATGAA GGCCGTCGAA
GAGGAGTAA
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| Protein sequence | MSESQLSLTP VKRSFQFGQH QVTLETGGVA RQADGAVLVD MADTVVLVTV VGRKDPAAAR
DFLPLTVNYQ ERTYAAGRIP GGFFKREGRP SEKETLTCRL IDRPIRPLFP EGFRQEVQVI
ATVLSLNDEV DADIPAMIGT SAALALSGIP FEGPIGACRV GHLDGEFVLN PTFSQTAESD
LDLVVAGTQD AVLMVESEAN LLPESTMLDA VLYGHEQMQV AIDTINDLAA EAGKPRWDWQ
PPAKNESLDS AVAELVRSDL EAAYQIADKQ ERSERVGALR DKAVEALADE EREGWGAGDV
GEAFKTLEKK IVRGRILAGH PRIDGRDNQT VRPLNVQAGV LPRTHGSAIF TRGETQAIVV
STLGTGRDAQ VIDALEGERR EPFMLHYNFP PYCVGETGFI GTPKRREIGH GKLAKRGVEA
VMPSDEEFPY VIRVVSEVTE SNGSSSMATV CGTSLSLMDA GVPLKAQVAG IAMGLIKEGD
EFAVLTDILG DEDHLGDMDF KVAGSKDGVT ALQMDIKIDG ITREIMEQAL DQARSGRLHI
LEQMNQVIDK PREQMSEYAP RLLTMRIDPE RIRDVIGKGG ATIRGLTEET GTNIDISDEG
VVTIASADKA AAEEAKKRIE LLTADVEVGK VYDGKVAKLM DFGAFVNILP GRDGLVHISQ
ISNNRVENVA DELSEGDSVR VKVLEVDRQG RIRLSMKAVE EE
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