Gene Hhal_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1729 
Symbol 
ID4710252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1895718 
End bp1896212 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID639856197 
Productferric uptake regulator family protein 
Protein accessionYP_001003295 
Protein GI121998508 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCT TACACCGCTC GCTGGTAACC GGATTCCCCA GCGAAGACCA CGACCACGAC 
GTCTGCCGCG AGACGGTCCT GGCGACCGCC GAGGTCATTT GTCGCCGTCG CGGCATGCGC
TTTACGCGGC TGCGCCGCCG GGTGTTGGAG CTGATCTGGG ATGAGCACCG TCCGGTCAAG
GCGTACGAGT TGCTGGATCG TCTGCGCGGC GAGCGGGCCG GCGCGGCGCC GCCCACCGTC
TACCGCACCC TCGATTTCCT GTTGCAGGAA GGGCTGATCC ATCGTGTGGA ATCCCTGAAC
GCCTATGTCG GTTGCGGCAA ACCCGGGCAC GTACACCCGG TTCAGCTGTT GGTCTGTCGC
TCCTGTGCGG CGGTGGCCGA ACTTGCCGAC GATGATGTGG CGCGTTTGCT CCAGCACAAG
GCCGGGCAGA TGGGGTTCCA GACCGATTCC GCAGTGGTGG AGCTTGAAGG TGTATGTCCC
CAGTGCAGCC GTTAG
 
Protein sequence
MARLHRSLVT GFPSEDHDHD VCRETVLATA EVICRRRGMR FTRLRRRVLE LIWDEHRPVK 
AYELLDRLRG ERAGAAPPTV YRTLDFLLQE GLIHRVESLN AYVGCGKPGH VHPVQLLVCR
SCAAVAELAD DDVARLLQHK AGQMGFQTDS AVVELEGVCP QCSR