Gene Hhal_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1727 
Symbol 
ID4710547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1894167 
End bp1894970 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID639856195 
ProductABC-3 protein 
Protein accessionYP_001003293 
Protein GI121998506 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGTGG ATGAGTTTAT CCTCACGGCG CTGGCTGCCG GACTGGGGCT GGCCCTGGTG 
GCCGGGCCGC TGGGCAGCTT CGTGGTCTGG CGGCGCATGG CCTACTTCGG CGAGACCCTG
GCGCACTCTG CGCTGCTGGG CGTGGCCCTG GGGTTCCTCT TCGGTATCAA CCTGAATCTT
GGCATCCTGA TGGTCTGCGT CGTGGTGGCC GTTCTGTTGG TGGTCCTGCG TCAGTACCAG
CGGCTGGCCA GCGATACGGT CCTCGGTATC CTGGCGCACA GCTCGCTGTC CTTAGGGCTG
GTGGCCATCG CCTTCATGGA GGGGCTGCGT GTCGACCTGA TGGGCTACCT CTTCGGCGAT
ATCCTGGCGG TGACGCCCAC CGACCTCTAC TGGATTTACG GCGGTGGGGT CCTGGTGCTG
GGGACGCTGA TCGGGATCTG GCGCCCGCTG CTGAGTCTCA CCCTGCACGA GGAGATGGCC
CGGGTGGAGG GGGTCCGCGT GCTGCCGGTT CAGCTCGCCT TCATGGCGCT GGTGGCGGCC
ACCATTGCCC TGGCCATGCA GATCGTCGGC ATCCTGCTGG TGATCTCCAT GCTGATCATC
CCTGCCGCCG CGGCGCGGGC CTTCGCCCGG ACCCCGGAGC AGATGGCGGT GATCGCCGCC
TTGATCGGTG CGCTGGCGGT GGTCGGCGGG CTGGCCGGTT CGTTCCGCTG GGATCTGCCC
ACCGGCCCGG CCATCGTGGT GACGGCCACG GCCATCTTCG CGGTAGTGAC CAGTGCGCGG
GGGGTGGTGG CGGCGCGTTT TTAG
 
Protein sequence
MAVDEFILTA LAAGLGLALV AGPLGSFVVW RRMAYFGETL AHSALLGVAL GFLFGINLNL 
GILMVCVVVA VLLVVLRQYQ RLASDTVLGI LAHSSLSLGL VAIAFMEGLR VDLMGYLFGD
ILAVTPTDLY WIYGGGVLVL GTLIGIWRPL LSLTLHEEMA RVEGVRVLPV QLAFMALVAA
TIALAMQIVG ILLVISMLII PAAAARAFAR TPEQMAVIAA LIGALAVVGG LAGSFRWDLP
TGPAIVVTAT AIFAVVTSAR GVVAARF