Gene Hhal_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1702 
Symbol 
ID4709958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1857623 
End bp1858495 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content71% 
IMG OID639856169 
Producthypothetical protein 
Protein accessionYP_001003268 
Protein GI121998481 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCTGT CCAAGCGGAT CGATCGGCTG CGCGCCCAGG CTGGCGGCCG GGCGGTGGCT 
GCGGTGTCTG AGTCGGCAAC GCCGGGTGTG CGTGAGCGCC TGGCGCGTAT CGAGACGCGC
CAGCGGCGCG CGGCGTGGCG GCCCCGCAGT CAGCGCCCCG ACGACCAGGC CGTGGCCGAG
CAGGTCGGTG GCTCGGTCCT GGCGCCCGGG CTCATTGAGG TCGAGCGTGT GGTGGGGCTG
GATACGGCCT ACGGCCGGCA GTCCCTGGCT CCGCTGCGAG GAGCGCTGCA GGGGATGCCC
GAGGGCGCCG AGCTGGATCC CCAGCGGGCA TTGTGGCTGG ATACCGAGAC CACCGGGTTG
GCCGGCGGGA CCGGCACCGT GGTGTTTCTG CTCGGGGTCG GTTGCCTGGC GGGCTCGGAC
CTGAGAGTTC GGCACTGGCT GCTGACCGGC TTCAGCGGCG AGCCGGCCAT GCTGGAGCGA
CTGAGCGAAC TGCTGGGGGG GACGGATGGG CTTGTCACCT ACAACGGCAA GTCGTTCGAC
ATCCCGTTGC TCCAGAGCCG GGCCCGGCTC CACGGGGTCG ACCTCGGGCT GCAGGGCCGG
ATGCATCTCG ATCTGCTCCA TCCGACACGG CGGGTCTTTC GTCGGCACTG GCCCAACTGC
CGGCTGACCA CGGCCGAACG ACGGCTCCTT GGGCGCGAGC GGCTCGACGA TCTGCCTGGT
GCCGAGGCGC CGGCGGCCTG GCTCGATTTC CTTCAGCGGG GCGACCCCCG GCAACTGCCG
GCGGTGGTGC GCCATAACAG CGACGATATC CTGGCCCTTG CGGCCCTCTG GGTGGCCCTG
GATCGGGTCT ACCGCGAAGG GGGCGCATCG TGA
 
Protein sequence
MSLSKRIDRL RAQAGGRAVA AVSESATPGV RERLARIETR QRRAAWRPRS QRPDDQAVAE 
QVGGSVLAPG LIEVERVVGL DTAYGRQSLA PLRGALQGMP EGAELDPQRA LWLDTETTGL
AGGTGTVVFL LGVGCLAGSD LRVRHWLLTG FSGEPAMLER LSELLGGTDG LVTYNGKSFD
IPLLQSRARL HGVDLGLQGR MHLDLLHPTR RVFRRHWPNC RLTTAERRLL GRERLDDLPG
AEAPAAWLDF LQRGDPRQLP AVVRHNSDDI LALAALWVAL DRVYREGGAS