Gene Hhal_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1697 
Symbol 
ID4709889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1854205 
End bp1854549 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content63% 
IMG OID639856164 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001003263 
Protein GI121998476 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTC TGATTTCCGC CGCGCAGGCT CAGCAGCAGC AGCCGGAGGA GCCCAACGTC 
TGGTTCAGCA TCATCCTGCT GGTGGGCATG ATCGCCCTGT TCTACTTCCT GCTGATCCGC
CCCCAGACCA AGCGGGCCAA GGAGCATCGG CAGATGGTCG AGGAGCTCTC CAAGGGCGAC
GAGGTGGTCA CCAACGGCGG GACCCTGGGG CGCATCACCG AGGTGGGCGA CACCTTCGCC
ACCATCGAGG TGGCCAACGG CGTGCAACTG CAGATCCAGA AGAACGCCGT GGCCAGCGTC
ATGCCCAAGG GCACCCTCAA GGAACAGGAC AAAAAGGGCA AGTAG
 
Protein sequence
MDFLISAAQA QQQQPEEPNV WFSIILLVGM IALFYFLLIR PQTKRAKEHR QMVEELSKGD 
EVVTNGGTLG RITEVGDTFA TIEVANGVQL QIQKNAVASV MPKGTLKEQD KKGK