| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1695 |
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| Symbol | secF |
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| ID | 4709933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1851380 |
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| End bp | 1852342 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639856162 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001003261 |
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| Protein GI | 121998474 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATCT TCAAGAACGA TCCCAATATC GACTTCCTCG GCCGGCGCCG CATCGGCTTC
GGGCTCTCGG CGGTGCTGCT GGTGCTCTCC ATCGGCTCCC TGCTCTGGCA GGGCCTCAAC
CTGGGCATCG ACTTCACCGG CGGGACCCTG GTCGAGGTCG GCTACGAGGA GTCCGTGGAG
GTCGCCGAGG TCGAGGCGGC GCTGCAGGGC ACCGATTACG CCGACGCCCA GGTCCTGCAC
TTCGGCTCGC CGCGGGAGAT CATGGTCCGT ATCCCGCCCA TGGAGGGCGT GGAACAGGCC
GCGATCTCCG AAGAGGTCCT CGCCAAGCTG CGCGAGGCCC ACGACGGCGT CGACCTCCGG
CGGGTCGAGT TCGTCGGCCC GCAGATCGGT CGCGAGCTCA CCGAACAGGG TCTGCTGGCG
CTGCTCTACG CCCTGGGCGG GGTGCTGGTC TACGTGGCCT TCCGCTTCGA GTACCGCTTC
GCCCTCGGTG CGGTGGCGGC GCTGGTCCAC GATATCGTGC TGATCCTCGG GTTCTTCTCG
CTCACCCGGC TGACCTTCGA TCTCACCGTG CTGGCGGCGT TGCTGGCGAC CATCGGCTAC
TCGCTGAACG ACACCATTGT CATTTCCGAC CGGATCCGTG AGAACTTCCT CAAGGTCCGG
AAGGGCACCA CCGAGTACGT CATGAACCTG GCCATCAACC AGACCCTTTC CCGGACCCTG
GTGACCTCCT TGACCACGCT GCTGGTGGTC GGATCACTGC TATTCCTCGG CGGCGAGATC
ATCCACGGGT TCGCCATGGC CCTGCTGGTT GGCGTACTGG TGGGTACCTA CTCGTCGATC
TTCGTCGCCA GCGCCTCCTC GCTGGCCATG GGCGTGAGCA AGCAGGACCT TATGCCGCCT
GAGAAGGAGG GGCAGGACCA GGAGGATCAC GAGTCGGTGA TTCCCCCTGG CGAACGCCCT
TAA
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| Protein sequence | MEIFKNDPNI DFLGRRRIGF GLSAVLLVLS IGSLLWQGLN LGIDFTGGTL VEVGYEESVE
VAEVEAALQG TDYADAQVLH FGSPREIMVR IPPMEGVEQA AISEEVLAKL REAHDGVDLR
RVEFVGPQIG RELTEQGLLA LLYALGGVLV YVAFRFEYRF ALGAVAALVH DIVLILGFFS
LTRLTFDLTV LAALLATIGY SLNDTIVISD RIRENFLKVR KGTTEYVMNL AINQTLSRTL
VTSLTTLLVV GSLLFLGGEI IHGFAMALLV GVLVGTYSSI FVASASSLAM GVSKQDLMPP
EKEGQDQEDH ESVIPPGERP
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