| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1693 |
|---|
| Symbol | |
|---|
| ID | 4710047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1848127 |
|---|
| End bp | 1850073 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639856160 |
|---|
| Product | putative serine protein kinase, PrkA |
|---|
| Protein accession | YP_001003259 |
|---|
| Protein GI | 121998472 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2766] Putative Ser protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCG CCGAAGACCT GATTGCCCGC TACGCCCGCA GCTACGAACG CCGCCAGGAG
CAGCAGCTGA CCCTGGCCGA GTACCTGGAA CTCTGCCGGG ACGACCCGAC GGCCTACGCG
TCTCCGGCGG AGCGGCTGGT CGCGGCAATC GGTGAGCCGC AGGTCTACGA CACCTCGAAG
GACGAGCGGC TGGGGCGCAT CTTTCTCAAC CGCACCCTGA AGATCTACCC CGCCTTCGAG
GACTTCTACG GCATGGAGGA AACCATCGAG CGGCTGGTCG GTTTCCTCAA CTACGCGGCC
CAGGGGCTGG AGGAGCGCAA GCAGATCCTT TATCTCCTCG GGCCGGTCGG GGGTGGCAAG
TCCTCGCTGG CCGAGCGGCT CAAGCAGTTG ATGGAGCGCT ACCCCATCTA CGTGCTCAAG
GCGGGCGAGG AGGTCAGTCC GATCTTCGAA AGCCCGCTGG GGCTGTTCGA TCCGGACCAG
CATGGGCCGG AACTGGAGGA ACGCTTCGGC ATCCCGCGGC GCAAGCTGAG CGGACTGCTC
TCGCCCTGGG CGGTGAAGCG ACTGGACGAG TTCGGCGGTG ATCTGAACCG CTTCCGGGTG
GTGCGGATCT ACCCCTCGAA GCTGCGGCAG ATCGGCGTGG CGAAGACCGA ACCCGGTGAC
GAGAACAATC AGGACATCTC GTCGCTGGTC GGTAAGGTGG ACATCCGCAA GCTGGAGCTC
TACAGCCAGA ACGACACCGA CGCGTACAGC TACTCTGGGG GGCTCAATCG CGCCAACCAG
GGCATCCTCG AGTTCGTCGA GATGTTCAAG GCGCCGATCA AGATGCTCCA CCCTCTGCTC
ACCGCCACCC AGGAGGGCAA CTACGTCGGC TCCGAGAACA TTGGTGCCAT CCCGTTCCAC
GGGCTGGTCA TGGCGCACTC GAACGAGTCG GAGTGGCAGA GCTTCCGGAA CAACAAGAAT
AACGAGGCGT TCCTCGACCG CATCTCGGTG ATCAAGGTGC CGTACTGCCT GCGCGTCAGC
GAGGAGCGGC AGATCTACGA CAAGCTCATC CGTGAGAGCG AGCTCGCCGA CGCCCCGTGC
GCACCCTGGA CCCTGGAGAT CATGGCCCGT TTCTCCGTGC TCACCCGGCT CAAGGAGCAT
GAGAACTCCA GCCTCTATTC CAAGATGCGC ATCTACGACG GCGAGAGCCT GAAGGAGACC
GACCCGAAGG CCAAGTCCAT GCAGGAGTAC CGCGACCAGG CCGGGGTCAA CGAGGGTATG
GACGGGATCT CCACGCGCTT CGCCTTCAAG GTTCTGTCGC AGACTTTCAA CTACGAGACC
GCGGAGGTGG CGGCCGATCC GGTCCACCTG CTCTATCTGC TCGAGCAGAA CATCAAGCGC
GAGCAGTTTC CCGAGGAGAC CGAACGCAAG TATCTGGAGA TCATCAAGGC GGAGCTGGCA
CCGCGCTACG CCGAGTTCAT CGGCAACGAG ATCCAGAAGG CGTACCTGGA GTCCTACGAC
GACTTCGGTC AGAACCTCTT CGAGCGCTAC GTGGGCTACG CCGACGCGTG GATCGAGGAC
CAGGACTTCA AGGATCCCGA CACCGGGCAG CTGATGGACC GGCAGGCGCT GAACCAGGAG
CTGACGAAGA TCGAAAAGCC GGCGGGTATC GCCAACCCCA AGGACTTCCG CAACGAGGTG
GTCAAGTTCG CCCTGCGCGC TAAGGCCCAG CAGGGTGGTC ACATGCCCAG CTGGACCTCC
TACGAGAAGA TCCGCGAAGT CATCGAGAAG CGGATGTTCA GCCAGGTGGA GGATCTGCTC
CCGGTGATCA GCTTTACCAC GAAGGGCGAC TCCGAGACCG AGCGCAAGCA CAGTGAGTTT
GTCCGCCGCA TGGTCGAGCG GGGGTATACC GAGCGCCAGG TGCGACGTCT GGTGGAGTGG
TACATGCGCG TCAAGCAGGC CGGCTGA
|
|---|
| Protein sequence | MDTAEDLIAR YARSYERRQE QQLTLAEYLE LCRDDPTAYA SPAERLVAAI GEPQVYDTSK
DERLGRIFLN RTLKIYPAFE DFYGMEETIE RLVGFLNYAA QGLEERKQIL YLLGPVGGGK
SSLAERLKQL MERYPIYVLK AGEEVSPIFE SPLGLFDPDQ HGPELEERFG IPRRKLSGLL
SPWAVKRLDE FGGDLNRFRV VRIYPSKLRQ IGVAKTEPGD ENNQDISSLV GKVDIRKLEL
YSQNDTDAYS YSGGLNRANQ GILEFVEMFK APIKMLHPLL TATQEGNYVG SENIGAIPFH
GLVMAHSNES EWQSFRNNKN NEAFLDRISV IKVPYCLRVS EERQIYDKLI RESELADAPC
APWTLEIMAR FSVLTRLKEH ENSSLYSKMR IYDGESLKET DPKAKSMQEY RDQAGVNEGM
DGISTRFAFK VLSQTFNYET AEVAADPVHL LYLLEQNIKR EQFPEETERK YLEIIKAELA
PRYAEFIGNE IQKAYLESYD DFGQNLFERY VGYADAWIED QDFKDPDTGQ LMDRQALNQE
LTKIEKPAGI ANPKDFRNEV VKFALRAKAQ QGGHMPSWTS YEKIREVIEK RMFSQVEDLL
PVISFTTKGD SETERKHSEF VRRMVERGYT ERQVRRLVEW YMRVKQAG
|
|---|
| |