Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1691 |
Symbol | |
ID | 4710035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1845222 |
End bp | 1846781 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639856158 |
Product | SpoVR family protein |
Protein accession | YP_001003257 |
Protein GI | 121998470 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACCGA ACGCGGCGGT TCAGCAGCAA CCCCTGTTCA CCGGTCTGGA CTGGGACTAT CGCGATGTGA TGCGCGTCTA CGATGCCGTC GAGCAGATCG CACAGGACGA GCTGAAACTC GATATCTACC CCAATCAGAT CGAGGTCATT AGCTCCGAGC AGATGCTCGA TGCCTACGCC TCGATGGGCA TGCCGCTGTT CTATCGGCAC TGGTCGTTCG GCAAGCACTT CGCCCGGGAC GAGATGCTCT ACCGCAAGGG GTACACCGGC CTCGCCTACG AGATCGTCAT CAACTCCAAG CCGTGTATCT CCTACATCAT GGAGGAGAAC ACGCTCACCA TGCAGACGCT GGTGGTGGCC CACGCTGCCT TCGGCCACAA CCACTTCTTC AAGAACAACC GGCTCTTCCG GGAGTGGACC GATGCTGAGG GCATCCTCGA CTACCTGGAT TTCGCCAAGG GGTACATCGC AGAGTGTGAA GAGCGCTACG GGGTGGAGGC GGTCGAGCGG GTACTCGACG CCGCCCACGC TTTGATGAGC CAGGGGGTGC ACCGCTACCC CAAGCCGCAG ACGCGTAGCC TGCGGGAGGA GCGCGACCGC GAGATCGAGC GGATTCGCTA CGAAGAGCAG ACCTACAACG ATCTCTGGCG CACGGTGCCC ACGGATCCGG ACGGAGAAAG GCCCGGTGGG GCTGATCCGG TGGAAATGCG GATGCAGCGG CTCGGATTGC CGGAAGAGAA CCTCCTGTAC TTCTTGGAGA AGCGGGCCCC GCGCCTAGAG CACTGGCAGC GGGAGGTGCT GCGCATCGTG CGTAATGTGG CGCAGTACTT CTATCCGCAG AAACAGACCA AGGTGATGAA CGAAGGCTGC GCGACGGCGG TGCACTACTA CATCATGAAC CGGCTGCACG AAAACGGGCA GCTGACCGAC GGGGCTTTCC TGGAGTTCCT GCACAGCCAC ACCAGCGTCG TATTCCAGCC GGAGTTCGAT GATCCGCGTT ACTCCGGCAT CAACCCCTAC GCCCTCGGGT TCGCCATCCT CGAGGATCTA CGCCGCATGG CCACCGACCC GACCGCGGAG GATCGGCGCT GGTTCCCCGA GGTGGCTGGC AGCGGGGACT GGCTGAGCGT GTGGCACCAC GCGTGGCAGG AGTACCGGGA CGAGAGCTTC ATCCTGCAGT TCCTCAGCCC CAAGGTGATC CGAGACTTCC GCCTTTTCCG GGTCCACGAC GACGCCGACG ACCCGGAGCT GTTGGTGGAT GCCATCCACG ACGACGCCGG GTATCGGGCG GTGCGGCGCT CCTTGGCGCA GCGACACGAT GTGGCCCGGC TGGAACCGGA TATCCAGGTG GTGGACGTGG ATCTGGCCGG TGATCGCACC CTGGTGCTCG AACACCGGGT TACGGACGGG GTCACGCTGG ACAAGGGCCA GGCGACGGCG GTGTTGCGCC ATCTAGCCAA CCTCTGGGGA TACGATGTCA AGCTTTACGA GGTCGATCCG GAGACCGAGC GGGTGATCAA CGAGTTCCCC CAGGTGTCAC CGGCGGACCC GGTCGCCTGA
|
Protein sequence | MAPNAAVQQQ PLFTGLDWDY RDVMRVYDAV EQIAQDELKL DIYPNQIEVI SSEQMLDAYA SMGMPLFYRH WSFGKHFARD EMLYRKGYTG LAYEIVINSK PCISYIMEEN TLTMQTLVVA HAAFGHNHFF KNNRLFREWT DAEGILDYLD FAKGYIAECE ERYGVEAVER VLDAAHALMS QGVHRYPKPQ TRSLREERDR EIERIRYEEQ TYNDLWRTVP TDPDGERPGG ADPVEMRMQR LGLPEENLLY FLEKRAPRLE HWQREVLRIV RNVAQYFYPQ KQTKVMNEGC ATAVHYYIMN RLHENGQLTD GAFLEFLHSH TSVVFQPEFD DPRYSGINPY ALGFAILEDL RRMATDPTAE DRRWFPEVAG SGDWLSVWHH AWQEYRDESF ILQFLSPKVI RDFRLFRVHD DADDPELLVD AIHDDAGYRA VRRSLAQRHD VARLEPDIQV VDVDLAGDRT LVLEHRVTDG VTLDKGQATA VLRHLANLWG YDVKLYEVDP ETERVINEFP QVSPADPVA
|
| |