Gene Hhal_1671 details

Gene Information

• Locus tag: Hhal_1671
• ID: 4709939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1823323
• End bp: 1823994
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639856138
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_001003237
• Protein GI: 121998450
• COG category: [R] General function prediction only
• COG ID: [COG0300] Short-chain dehydrogenases of various substrate specificities

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAGC TGATCATCGG CGCCAATCGA GGCATCGGCC TGGAGACCAC ACGGCAGTTG 
CGCGCCCGCG GCGACGACGT AATCGCGACC GCGCGCAACG CCTCCGAGGA ACTGCGCAGT 
ACCGGGGCGC AGATCCAAGA GGGGGTCGAC ATCACCCGCC ACGACACCCT CCACGCCCTG 
GCCGACCGGC TGTCCGGGGA ACCCCTGGAG TGGGTCCTGG TGGTTTCGGG GCTGATGCGG 
GTCCAGCGCC TGGGGGCCCT GGATGAGACC GCGGTGGCCG GCATCCGCGC CCAGTTCGAG 
ACCAACGCCC TGGGCCCGCT GATGGCCGCC GAGGCACTCC ACCCGCTGCT CAACGACGGC 
GGCACGCTCG GCATCGTCAC CAGCCGCATG GGGTCCATCG CCGACAACAC CTCCGGGAAT 
AGCTACGGGT ACCGGATGAG CAAGGCAGCG GTGAACATGG CGGCTGTGTC GCTCGCCCAC 
GACCTGCGCC CGCGCGGCAT CGCCGTGGCA CTGCTGCATC CCGGCTGGGT GCGTACCGAC 
ATGACCAGCC ACAACGGACT GATCGACCCA CCGGAGTCCG CCGCCGGTAT CATCGAGCGT 
ATGGGCCAGG TCAGTCTGGA AGACTCAGGG CGCTTCTGGC ACGCGCCTAA TCGGGAAGTC 
CTTCCCTGGT GA 

 

Protein sequence

MAKLIIGANR GIGLETTRQL RARGDDVIAT ARNASEELRS TGAQIQEGVD ITRHDTLHAL 
ADRLSGEPLE WVLVVSGLMR VQRLGALDET AVAGIRAQFE TNALGPLMAA EALHPLLNDG 
GTLGIVTSRM GSIADNTSGN SYGYRMSKAA VNMAAVSLAH DLRPRGIAVA LLHPGWVRTD 
MTSHNGLIDP PESAAGIIER MGQVSLEDSG RFWHAPNREV LPW