Gene Hhal_1655 details

Gene Information

• Locus tag: Hhal_1655
• Symbol: recA
• ID: 4709839
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 1808578
• End bp: 1809642
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639856122
• Product: recombinase A
• Protein accession: YP_001003221
• Protein GI: 121998434
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02012] protein RecA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.384834
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGACG ATCGCAAAAA GGCGCTTGGC GCCGCGTTGG GACAGATCGA GAAGCAGTTT 
GGCAAGGGCG CCGTGATGCG CATGGGCGAT GCTCGTGCCG TACGTGGCGA TGTCAAGAGC 
ATCTCCACCG GGTCCCTGGC CCTGGACGTG GCGTTGGGTA TTGGTGGCCT GCCGCGGGGA 
CGGGTGGTGG AGATCTACGG GCCGGAGTCG TCCGGGAAGA CGACCCTGAC CCTGCACATC 
ATCGCCGAGG CGCAGAAGGC GGGTGGGGCA GCGGCGTTCG TCGATGCCGA GCACGCCCTG 
GACCCGGATT ACGCCGAGGC GGTCGGGGTC GATATCAACG ACCTGCTCGT CTCCCAGCCG 
GATACCGGCG AGCAGGCGCT GGAGATCGCC GACATGCTCG TCCGCTCGGG CGGGCTCGAT 
GTGGTGGTGG TCGACTCGGT GGCTGCCCTG ACGCCCAAGG CCGAGATCGA GGGCGAGATG 
GGTGATTCGC ACGTTGGCCT GCAGGCGCGG CTGATGTCCC AGGCGCTGCG CAAGCTCACC 
GGCAGCATCC AGCGCTCCAA TACCCTGGTG GTGTTCATCA ACCAGATCCG CATGAAGATC 
GGCGTGATGT TTGGCAGTCC GGAGACCACC ACCGGCGGCA ATGCGCTGAA GTTCTACTCC 
TCGGTGCGGA TGGACATCCG CCGCCTCGGT GCCATCAAGA AGGGCGACGA GGTCCTCGGC 
AACGAAACCC GGGTCAAGGT GGTCAAGAAC AAGATGGCGC CGCCGTTCAA GCAGGCGGAG 
TTCGAGATCC TCTACGGAGA GGGCATTTCC CGCGAGGGCG AGATCATCGA TATGGGCGTG 
GCCCAGGGCT TTGTGGATAA ATCCGGTGCC TGGTACAGCT ACAACGGGGA CCGGATCGGG 
CAGGGTAAGG ACAATGCGCG GCAGTTCCTG CGCAACAACC CGCAGATCGC CGCGGATATC 
GAGGCTCGCA TCCGCGAGAA GGTCTTGGGT ACCGCCTTGC CGGAAGCCGA ACCGACCGAG 
GATGCCGCCT CCGACACCGA GCAGAAGTCC GGCAAGGGGT CATGA 

 

Protein sequence

MDDDRKKALG AALGQIEKQF GKGAVMRMGD ARAVRGDVKS ISTGSLALDV ALGIGGLPRG 
RVVEIYGPES SGKTTLTLHI IAEAQKAGGA AAFVDAEHAL DPDYAEAVGV DINDLLVSQP 
DTGEQALEIA DMLVRSGGLD VVVVDSVAAL TPKAEIEGEM GDSHVGLQAR LMSQALRKLT 
GSIQRSNTLV VFINQIRMKI GVMFGSPETT TGGNALKFYS SVRMDIRRLG AIKKGDEVLG 
NETRVKVVKN KMAPPFKQAE FEILYGEGIS REGEIIDMGV AQGFVDKSGA WYSYNGDRIG 
QGKDNARQFL RNNPQIAADI EARIREKVLG TALPEAEPTE DAASDTEQKS GKGS